Cyclopterus lumpus (lumpfish): 117734582
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Entry
117734582 CDS
T09199
Symbol
tmod1
Name
(RefSeq) tropomodulin-1 isoform X1
KO
K10370
tropomodulin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117734582 (tmod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117734582 (tmod1)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Capping proteins
117734582 (tmod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
LRR_6
Paralemmin
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
117734582
NCBI-ProteinID:
XP_034394625
Ensembl:
ENSCLMG00005023153
LinkDB
All DBs
Position
1:8732462..8756387
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AA seq
389 aa
AA seq
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MSVLKKEMEKYRDIDEDELLKKLSEEELQRLEDELEELDPDNALLPAGMRQKDQTKKSPT
GMFQRDNLLAHLEKQAKEDPEAEDLVPFTGEKRGKAFVPKKMVDPIMENVTLEPELEEAL
ASASDAELCDIAAILGMHTLMSNQQYYEALASSTIVNKQGLNSVIQCTQYKPVPDEKPNS
TDVEDTLLRMKRNDPDLVEVNLNNIKNIPVKTLKAYAEALMKNTVVERFSIVGTRSNDPV
AFALAEMLKVNTTLKSLNVESNFITGTGILYLIASLQYNTILQELKIDNQSQPLGNKVEM
EIASMLEKNTTLLKFGYHFTQQGPRLRGSNAMMNNNDLARVVRSESDGSFTLTLSVPELE
RAFGKKFKSKTKKRRLEGGPIFPKSRTNM
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttgaagaaggagatggagaagtacagggacatagacgaggacgagctgctg
aagaaactgtcagaggaggagctgcagcgattagaggatgaactagaggagctggatcct
gataatgcattgttgccagctgggatgcggcagaaggaccagaccaagaaatctccgacg
ggaatgtttcagagagacaacctgctggcccatctggagaagcaggccaaagaggatcct
gaggcagaggacctggtgcccttcacaggggagaagagagggaaagccttcgtgccgaaa
aagatggtggaccccatcatggagaatgtgactctggagccggagctagaagaagccctg
gcgagtgcatctgatgctgaactctgtgacatcgcagccatcctgggtatgcacaccctg
atgagtaaccagcagtactacgaagccctggccagcagcaccatagtcaacaagcaaggc
ctcaacagtgtgatccagtgcacccagtacaaaccagtccctgatgagaagcccaactcc
actgacgtagaagataccctgttgagaatgaagaggaacgaccccgacctggtggaggtc
aacctcaacaacatcaagaacatccctgtcaagactctgaaggcgtacgctgaggctctg
atgaagaacactgtggtggagaggttcagtattgtaggaaccaggagcaacgaccctgtt
gcatttgccctggcagagatgttgaaggtgaacacgacgctgaagagcctgaacgtcgag
tccaacttcattacagggacaggaatcctgtacctcatagcgtcactgcagtacaacacc
atactacaggagctcaagatagacaatcagagccagccgctcggcaacaaggtagagatg
gagatagccagcatgctggagaaaaacaccacgctgctgaagtttggatatcatttcacc
cagcagggcccgcgcctccgaggctccaacgccatgatgaacaacaacgacctggctcgg
gttgtcaggtcggagtcggacggctccttcaccctcactctgtctgttcctgagctggaa
agggccttcgggaaaaagttcaagtccaagactaaaaagagaaggcttgagggaggtccc
atcttccctaagtctcggacgaatatgtag
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