Cyclopterus lumpus (lumpfish): 117734619
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Entry
117734619 CDS
T09199
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04136
Autophagy - other
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117734619 (wipi1)
04136 Autophagy - other
117734619 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117734619 (wipi1)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117734619 (wipi1)
Membrane trafficking [BR:
clum04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117734619 (wipi1)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117734619 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR55
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
117734619
NCBI-ProteinID:
XP_034394704
Ensembl:
ENSCLMG00005007539
UniProt:
A0A8C2XBE2
LinkDB
All DBs
Position
8:8607699..8623727
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AA seq
457 aa
AA seq
DB search
METGEGAGGPGGPDGPGMQFGCASFNQDSTSLALGTKTGYKLFSLTMVKKLDCIHESAET
PDVYIVERLFSSSLVVVVNTTMPQRMNIYHFKKGTEICNYSYPNNILSVKLNRQRLVVCL
DESIYIHNIKDMKLLKILLNTPSNPSGLCALSINHSNSYLAYPGSATIGEIVVYDANNLN
TVTMIPAHDSPLAALTFNASATKLASASERGTVIRVFTIPEGLRLFEFRRGMKRYVNISS
LSFSPDGQFLCASSNTETVHIFKLEQLGPSGGDEAATWTAYVGKMFSAASSYLPAQVSGM
MSQDRAFATVHLVMSAQRNICTLAIIQKLPRLLVATADGQLFIYTMDPLDGGECTLAHKH
RLFGVDDDQGEGKEAEGKEVTGPAQACPSYAATAALPASGPVTATLTGYSEDGGAKKGEV
IPEHEFAAGPVCLDDENEFPPINWCRDGTGGGQARRS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagagggtgccggcgggcctggcgggccggacggaccagggatgcagttt
ggctgcgcctctttcaaccaagactccacgtcactggctttgggaacaaagactggctac
aagctgttttctctgaccatggtgaaaaagctggactgtatccatgagagtgcagagact
ccagatgtctacatcgtggagcgtctgttctccagcagtctggtagtcgtagtgaacacc
accatgccacagcgcatgaacatctaccacttcaagaaggggacggagatctgcaactac
agctatcccaacaacattctttctgtcaagctcaacagacagaggctggtggtgtgcctt
gatgagtccatttacatccacaacatcaaagacatgaagctgctaaagattctgctcaac
actccgtccaacccctcaggtctctgtgctctttctatcaaccattccaactcctacctg
gcataccccggcagtgccaccattggggagatcgtagtgtatgatgccaataatttgaac
acagtgaccatgatcccggctcatgacagtcctctggcagctcttaccttcaacgcctcg
gccaccaaacttgccagcgcctctgagcggggcaccgtcatccgagtgttcaccataccc
gagggcctgcgtctgtttgagttccgccggggcatgaagaggtatgtcaatataagctct
ttatccttcagcccggatggccagttcctctgtgcgtccagcaacacagagacggtgcat
atctttaaactagagcagctggggccaagtggaggggatgaggctgccacctggacagcc
tacgtggggaagatgttctcagcagccagcagctacctccctgctcaggtatctggcatg
atgagccaggaccgggcctttgccaccgtccacctcgtgatgtcggcccagaggaacatc
tgcaccctagctataatccagaagcttccccggctactggtggccacagctgacggacaa
ctgttcatctacaccatggatccactggatggaggcgagtgcacgttagcccacaaacac
aggctgtttggtgttgatgatgatcagggtgaaggaaaggaggcagaaggaaaggaggtc
acagggccagcacaggcttgtccatcctacgctgcgaccgctgccttaccagcctctggt
cccgtcactgcaaccctcactggctactctgaagatggcggtgcaaagaaaggtgaagtc
attccagaacacgagtttgctgcgggacctgtgtgtctggatgacgagaacgagtttcct
cctattaattggtgcagagacgggactggaggtggccaggccaggcgctcgtga
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integrated database retrieval system
