Cyclopterus lumpus (lumpfish): 117734623
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Entry
117734623 CDS
T09199
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
clum00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
clum01100
Metabolic pathways
Module
clum_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117734623 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117734623 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117734623 (xylt2)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
117734623 (xylt2)
Glycosyltransferases [BR:
clum01003
]
O-Glycan biosynthesis
Glycosaminoglycan
117734623 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
117734623
NCBI-ProteinID:
XP_034394712
Ensembl:
ENSCLMG00005005805
UniProt:
A0A8C2X1F4
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All DBs
Position
8:6739441..6752330
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AA seq
879 aa
AA seq
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MVASDRVQKLLRRYKLAIAAALTILLVQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDL
KRDPSVWEKQNSLSGKNRGRWSGRSERTGGTAASALRRGTSRKGERPGIRLKSPQERGMT
GAGLDGVVLHDLSSSRNFSETRGGADGAAKLPAAAMQGEPGSVDGAHQAPSSDFVPKCDI
GGKDALSALHRAGSQQCRQEIANIVCQHQAGKLMPDALPQFCPQLGVSSQVQAFGELDNS
LSNVESRVRVAFVLMVHGRAIRQLKRLIKAIYHRDHYYYIHVDKRSGYLHREVLQIAELY
PNIRATPWRMVTIWGGASLLKAYLRSMQDLLSMLDWKWDYFINLSATDFPTRTNDELVTF
LSQQRDKNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERSIPEGLEVSGGSDWFAL
TRRFVEYVINSQDDLVSGLKQFYSYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRK
LGCKCQYKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESSVNQEAIDILDTHLYG
QYAPGIVAIKAYWESLFEQLDGVGSLGDTALTAYTAFIRLGLKNLATTQSNVEACRFEPV
GYPLLVHVYFYDDRFQGYLVRQEVQDVGSKVRETLEMWAVPHATLVLETNLKEFERLKNL
EIGTDWDPKERIFRNFGGVIGPLNEPLAVQKWARGPNLTATIVWIDPALVVAASYDISVD
VDAEYTQYKPSLQRPLRPGTWTVRVLKQWERVAEVRFLVMPLTFKDKEPLRQEEDSWLHA
GPPGNLYLEQSFQQLSSVLNLPPQEPALQEAQRKAQLVGQPLEAWVDSSVGTFWVTGGLC
ATQSSSCPAMGPCAKTSWSSLSPDPKSELGPVKSDGRIR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgaccgagtgcagaagctgctccggcgatacaaactagcgatcgccgcc
gcgctcactatcctcctggtccaggggctggtggtatggagtctgaggagtctggaggag
ggcgaggcagagaggaaaacgcgacgctctaagctgcctgaccacaacagccaggacctc
aaaagagacccgtcagtttgggagaaacaaaactctttgtcggggaagaacaggggcaga
tggagcggcaggtcggagaggacggggggcacggcagccagtgcgctgaggagagggacc
agtcgcaaaggggaaaggccaggcatccggctgaagtctccccaggagcggggcatgacg
ggagcaggactggacggcgtggtcctccacgacctgtccagcagccgtaacttcagcgag
acccgaggtggagctgacggggcggccaagttaccggctgccgccatgcagggggagcca
ggcagcgtggacggggcgcaccaggcccccagcagtgactttgtgcccaaatgtgatatc
ggaggcaaggacgcgctgtccgcccttcatcgcgccgggtcacagcagtgcagacaggag
atcgccaacatcgtgtgtcagcatcaggccgggaagctcatgccagacgcgcttcctcag
ttctgcccccagctcggtgtatcaagtcaggtgcaggcgtttggtgagctggacaacagc
ctgtccaatgtggagagccgcgtccgagtggctttcgttctgatggtccacggccgcgct
atacgacagctcaagcgcctcatcaaagccatttatcaccgtgaccactactactacatc
cacgtggacaagcggtccgggtacttgcaccgggaggtcctgcagattgccgagctgtac
ccaaacatacgagctacgccctggcggatggtcaccatctggggcggtgccagcctcctg
aaggcttatctccgcagcatgcaggacctgctctccatgctggactggaagtgggattat
ttcatcaatctcagcgccacagatttccccaccaggaccaacgatgaactggtgacgttt
ctgtcgcagcaaagagacaagaacttcctcaagtcccacgggagagagaacgcccggttc
attaagaagcagggcctcgaccgtctcttccatgagtgtgacaaccacatgtggcgtctc
ggcgaacgcagcatccccgaaggcctcgaggtctcgggtggctctgattggtttgcgctc
acccgtcgcttcgtcgaatacgtcatcaactcccaggatgacctggtgtcggggctgaag
cagttctattcctacgctctgctccccgctgagtccttcttccacacggtgctcggtaac
agtcacatgtgtgacaccctggtggacaacaacctgcgcgtcaccaactggaaccgtaag
ctgggctgtaaatgccagtacaagcacattgtcgactggtgtggctgctctcccaatgat
ttcaaaccacaagacctcatccggatccagcaattgacccgtccgacattctttgcacgc
aagtttgagtcatcagtgaaccaggaggccatcgacatcctggacacgcacctgtatggc
cagtacgctccgggcatcgttgccattaaggcgtattgggaaagcctgtttgagcagttg
gatggcgtgggctcgctcggagacacagctctcacagcttacactgctttcattcgcctc
ggcctaaagaatctggcaactactcagagcaacgtggaggcttgcaggttcgaaccagta
ggctaccctctactagtacacgtgtacttttatgacgaccgtttccaaggatatctggtg
cgtcaggaagttcaggatgtgggttcaaaggtcagggagacgctggagatgtgggcggtg
ccccatgccacgcttgtcctcgagacaaacctgaaggagtttgaaaggctcaagaacctg
gaaatcggcacagactgggatcccaaagagagaatctttcgtaactttggtggcgtgatc
ggccctttgaatgaaccactggcggtccagaagtgggcacgtgggcccaacctcacagcc
actattgtctggattgacccggctctggtagtggcagcgtcttatgacatttccgtggat
gtggatgcggagtacacccagtacaaaccttcgctgcagcgccccctgcggcccggcacc
tggacagtgcgtgtgttaaaacagtgggagcgcgtggcagaagttcgcttccttgtcatg
cccttaaccttcaaagacaaggagccgctacgccaagaagaggacagctggctccatgcg
ggtcctccagggaacctgtacctggagcagagcttccagcagctgagctccgtgctgaat
ctgcctccccaggagccggccctgcaggaggcccagcgtaaagcccagctggtgggtcag
ccccttgaagcatgggtggacagcagcgtcgggaccttctgggtcacaggcggtctgtgc
gccacacagtcgtcctcttgcccggccatggggccgtgcgccaagacctcctggagctcg
ctgtccccggaccccaagtccgaactgggcccagtcaaaagtgatgggcggatcaggtag
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