Cyclopterus lumpus (lumpfish): 117734704
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Entry
117734704 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: keratin, type I cytoskeletal 20-like
KO
K07604
type I keratin, acidic
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117734704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117734704
04147 Exosome [BR:
clum04147
]
117734704
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117734704
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117734704
Exosomal proteins of other body fluids (saliva and urine)
117734704
Exosomal proteins of colorectal cancer cells
117734704
Exosomal proteins of melanoma cells
117734704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
V-SNARE
Tweety
Rep3_N
IFT57
ATG14
DUF745
THOC7
Sec3_CC
FKBP15
DUF1090
Motif
Other DBs
NCBI-GeneID:
117734704
NCBI-ProteinID:
XP_034394841
LinkDB
All DBs
Position
8:1006438..1008347
Genome browser
AA seq
273 aa
AA seq
DB search
MTSFSSRGSLSSMRSSNVMAPSSSRRLVSSGAGXVXGGAGGSGVRVSKTSFSSCPTGGSF
NLSDAVDVSDNKKVAMQNLNLASYLNKVRSLETANGALELKIRQFLESKTRPEGHDCTAF
RVSIKDLQDQVRTGSAELNKEVSVSTETLQTSKTEFGEVRRTLQXLEIKLQAQMSKKGAL
EASLAETRSRYANMLRGYQRQVGNLEEQLAQLRTDLENQKLMYADLLDIKTRLELEIAEY
QRLLDGESSTSMTTRVVTIMQEVDEHGNVISSS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttctccagccgcggcagcttgtcctccatgaggagctccaacgtgatggcg
ccctcctcctcccgtcggctcgtgagctcgggggccggangcgtgtagggaggagctgga
gggtccggagtccgtgtctccaagacctccttctcctcctgccccaccggcggttccttc
aacctgtccgacgccgtcgacgtgtccgacaacaagaaggtggccatgcagaacctgaac
ctggcctcctacctgaacaaggtgcgcagcctggagaccgccaacggggcgctggagcta
aagatcaggcagttcctggagagcaagaccagacccgagggtcacgactgcaccgcgttc
cgggtctctatcaaagacctgcaggaccaggtgaggaccggttctgccgagctgaacaaa
gaggtttctgtgagcacggagaccctgcagacgtccaagaccgagtttggagaggtcaga
cggacccttcagnntctggagatcaaactgcaggctcagatgagcaagaaaggagccctg
gaggcatctctcgctgagaccaggagccgctacgccaacatgctgaggggctaccagagg
caggtggggaatctggaggagcagctggcccagctgaggaccgacctggagaaccagaag
ctcatgtacgccgacctgctggacatcaagacccggctggagctggagatcgccgagtac
cagaggctgctggacggggagagctccaccagcatgaccactagggtggtgaccatcatg
caggaagtggacgaacatggaaacgtgatcagcagcagttag
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