KEGG   Cyclopterus lumpus (lumpfish): 117734739
Entry
117734739         CDS       T09199                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 7-like
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117734739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117734739
   03036 Chromosome and associated proteins [BR:clum03036]
    117734739
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117734739
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     117734739
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR5
Other DBs
NCBI-GeneID: 117734739
NCBI-ProteinID: XP_034394896
LinkDB
Position
8:6560017..6561944
AA seq 223 aa
MPSFHLAEVSVRNTVNRNLQKESWPGSRVQQLQYGFRQSDTVGRVNLVSGHVKTQLIALD
KEVYDIAFSRAGAGRDMFASVGADGSVRMFDSXHLELSTIIYEDPQHHPLLRLCWNKQGP
NYLATMAMEVVILNVCVPCTPVARLNNXACVNGIAWAPHSSCHICTGGKGSYGMWDIIRG
KNGLEDPILAYTSEGEINNMQWASTLPDWIAICYNNCLEILRV
NT seq 672 nt   +upstreamnt  +downstreamnt
atgccgtcatttcatttggctgaagtgtcagtcagaaacaccgtgaatcgtaacctgcag
aaagagagctggccggggtcacgagtccagcaacttcagtacggtttcaggcaaagtgat
acagtgggacgcgtcaacctggtgtctgggcacgtgaagacccagctgattgctcttgac
aaagaggtgtatgacatcgcgttcagccgagcaggagccggcagagatatgtttgcctct
gtgggggccgatgggtcggtccgcatgtttgactctnggcacctggagctcagtaccatc
atctatgaagacccccagcaccacccgctgctccgcctttgctggaacaagcaaggcccc
aactacttggctacaatggccatggaggtggtcatcctgaatgtatgtgtgccttgcacc
ccagtggctcggctgaacaacngcgcttgtgtcaacggcatcgcttgggccccccactcg
tcatgtcacatctgcactggaggtaaaggctcctacggaatgtgggatataataaggggg
aaaaacggacttgaggatcccatcctggcctacacgtctgaaggggagatcaacaacatg
cagtgggcgtccacgctgccggactggatcgctatctgctacaacaactgcttggagatc
ctgcgtgtctaa

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