Cyclopterus lumpus (lumpfish): 117734797
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Entry
117734797 CDS
T09199
Symbol
hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117734797 (hcrt)
04081 Hormone signaling
117734797 (hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117734797 (hcrt)
Cytokines and neuropeptides [BR:
clum04052
]
Neuropeptides
GPCR binding
117734797 (hcrt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
117734797
NCBI-ProteinID:
XP_034394955
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All DBs
Position
8:15864849..15866271
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AA seq
149 aa
AA seq
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MTPLHTSQKMPWFPANFQKAAGMDTSNRKVLVLVLMLLLSQLACDAHPVSECCRRPARFC
RLSVLLCRSHSPNIGGALPGDAAAGILTLGKRNEDEDNLQSRLHQLLQGSRNQAAGILTM
GKRIAERAGEQYMDWMAQSGSAITLHDLS
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgactccccttcacacaagccagaagatgccgtggttccccgccaacttccagaaggct
gctgggatggacacatctaacaggaaagtcctggtgctggttctgatgttgctgctgtct
caactggcctgtgacgctcaccccgtgtctgaatgctgcagacggccagctcgcttctgt
cgcctctcggtgcttctgtgtcgttctcacagcccaaacattggtggagcgctcccggga
gacgccgccgccggcatcctcactctgggcaaacgaaatgaagacgaagataacctgcag
agccgcctccaccagctcctgcaaggctcccggaatcaggcagccgggatcctgacgatg
gggaagaggattgctgagagggctggagagcagtacatggactggatggctcagtcaggg
tcagccatcacactacatgatttaagctaa
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