Cyclopterus lumpus (lumpfish): 117734810
Help
Entry
117734810 CDS
T09199
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117734810
04020 Calcium signaling pathway
117734810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117734810
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117734810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3935
Motif
Other DBs
NCBI-GeneID:
117734810
NCBI-ProteinID:
XP_034394969
LinkDB
All DBs
Position
8:18651167..18662137
Genome browser
AA seq
1247 aa
AA seq
DB search
MLQAGDERSSTFQVVDSLVVAFFVLEMLVKMLAKGCFGYQGSYLGNRWHRLDLFINCGVL
FGHFMENVNFHFQICRVLGPMRLVSRVTSIRDVFAVLMDIFPMLLNVLFLYLFVVHIFGV
MGVQLWAGLLRNRCFLAEDVPAEYKASMAPYYTSMYDDYYPYICSTDGMSGMRRCHNLPP
SVENGQACTLTPPGDALGPPVANACVNWNTLYNICRAGDLNPSHGAINFDNIGYAWIAIF
QVITMEGWSNIMFYVMDAYSFWCFVFFVLVTIMGSFIMMNVCAVVIATQFSDNLDQIKEC
DRRVTEAASISGVFSKLTGCLNGIGLAVCSYLQVLTNRRRNRVHHKGAGTDDKSIMVEIC
TPVTDWLLRVVRNKIFDRVIIFAVFLSILTMAAEHHDQPMELTSVLRISNNILTVVFVVE
MVLKLVALRWLYFKDNNNLFDFFIVIISLWETITKVSGRLSVLRVLRFGRMLHFFPHLKK
QLLVLKRAMVDAAPLCLIMLFFILLFSLIGRQLFGKHFEFRTVDGDPDRKNFDTMLWSMV
TVFQILTEEDWNLVLYNMMEATSPWAAIYFVAVLVTGKHVLLNVLVGIVIQGFQDRSTED
GPSDRDSSQSAGSSPADGTPEDPPEEGSLPTNNKDTRSLNWIQKTLRWFKEHEDWSFYML
SPQNRFRIFCQRVIVTKIFNYTVLAFIVLNCITIAMERPGIKPGSTEKLFLKVSSYIFSA
VFLVEMLFKVLALGLLVGPESYCRSAWNVMDGLLVILSFANILVSLVSKEHKMLGVVKVL
RLLRTFRPLRVIKRAPKLKLAVEALIAAVKPIGNITLICCAFIFFYAILGVQLFKGKFDV
CIGEFVEHITNKTDCLSANYRWERKFFNFDSLPQALMSLFAMYSKDSWVHIMYNGLDAVG
VDQQPVMNHNEWVLFYFIPFMIMSFFLLDMFIGVMVDTFHQCQQKQKRLDEAEGTALHVR
GRASYSRTRRCVHALCTSRYLDLFMAAIIGMSVMVMALEHYGEPQYITQLTECCHYVFTL
ILIGEVLLKVVAFGGRRFLRNSWNLLDLVVVFVSVLGIVVTEMKMTHTITINPSILRVGR
VLKLAQVLKAEKIRVLLTTVIKTLAQVGNICLLFIFFFYVYAALGVELFGELECVNKDLC
RGINEHVNFESFGIALLALFQVCTGDNWSVIMKDTMTQDRQDSNYLLWVSPIFFISFVIM
AQFVLVNLVVAVIMQAMEDSKEVKEERVAKDLLSLTPVDSTHREDRL
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgctccaagccggtgacgagaggagctccacgtttcaggttgtggactctttggtcgtg
gcgttttttgtgctagaaatgctcgtcaagatgttggccaagggatgctttggttaccag
ggcagttacctcggcaaccgatggcacaggttggaccttttcatcaactgcggagtgttg
ttcggccactttatggaaaacgtcaacttccacttccaaatctgccgggtgctcggaccg
atgcggctggtcagcagagtgaccagtatacgggacgtgttcgcggtcctgatggacatc
ttccccatgctcctcaacgttctcttcctctaccttttcgtggtccacatcttcggggtc
atgggagtccagctgtgggccgggctgctgcgcaaccgctgcttcctggcggaggacgtc
cccgcagagtacaaggcgtcgatggctccctactacacgagcatgtacgatgattattac
ccgtacatctgttcgaccgacggcatgagcggcatgagacgctgtcacaacctgccgccg
tccgttgagaacggccaggcgtgcactctgacccctcccggcgatgcgctgggccccccg
gtggccaacgcctgcgtgaactggaacacgctctacaacatctgtcgtgctggggacctg
aacccgagccatggggccatcaactttgacaacattggctacgcctggatagccatattc
caggtcatcactatggaaggatggtcgaacatcatgttttacgtcatggacgcctattcc
ttctggtgctttgtgtttttcgtcctcgtcaccattatgggctcctttatcatgatgaac
gtgtgcgcggtcgtcatcgccacccagttctctgacaacctggaccagataaaggagtgc
gacaggagagtcacggaggccgcgtccatctcgggggtcttttcaaagttgaccggctgc
ctgaatggaatcggactcgccgtctgcagttatttacaggttttaacaaatagacgtcgt
aaccgggtccatcataaaggcgccgggacagatgacaagtcgatcatggttgaaatctgc
acaccggtcaccgactggttgctcagagtcgtcagaaacaagatcttcgacagagtgatc
attttcgccgttttcctcagcatcctcaccatggccgcagagcatcacgaccagccgatg
gagttgacgagcgtgttgcggatcagcaacaacatcttgaccgtggtctttgtggtggag
atggtcttgaagctggtggctctcaggtggctgtatttcaaggacaacaacaacttgttt
gactttttcatcgtcatcatcagcctgtgggagacgatcactaaagtcagcggcaggttg
tcggtcctccgggtgctacggtttgggaggatgctccacttcttccctcatctgaagaag
cagctgctggtgctgaagagggccatggtggatgcagctccactctgcttaatcatgcta
tttttcatcttacttttcagtctcatcggcaggcagctgtttggaaagcactttgagttc
aggactgtggacggagaccccgacaggaagaacttcgacacaatgctctggtccatggtc
actgtgttccagattctgactgaggaggactggaacctggtgttatataacatgatggag
gccaccagtccgtgggccgccatctactttgtggcggtcttagtgacgggaaaacacgtg
cttctgaacgtcctcgtgggcatcgtcattcagggcttccaagacagatccaccgaggac
ggcccgtctgatcgagactcctctcagtccgccggctcctctcctgccgacgggaccccc
gaagaccctcccgaggaaggttccttacctacaaacaataaggacaccagatctctgaac
tggatccagaaaacactccgctggttcaaagaacatgaagactggtcgttctacatgttg
tctccccagaaccgattccgcatcttttgccaacgtgtgattgttactaagattttcaac
tacacggttttggcctttattgttctgaactgtatcaccatcgctatggagaggcctgga
ataaaacctggaagcacggagaaattgttcctgaaagtttccagttacatattctctgct
gtcttcctggtcgagatgcttttcaaggttctggctctgggtctgctggtcgggcccgag
agctactgccggtcggcctggaacgtgatggacggcttgctggtgattctttctttcgcc
aacatccttgtttctctggtcagcaaggaacacaaaatgctgggcgtcgtgaaagtgttg
cgcctgctccgcacattccgccccctgagggtcatcaagcgagccccgaagctgaagctg
gccgtggaggctctgatcgccgccgtcaagcccatcgggaacatcacgctcatatgctgc
gccttcatctttttctacgccatcctcggcgtgcagttgttcaagggaaagttcgacgtc
tgtatcggcgaattcgtcgaacacatcaccaacaagacggactgtctgtcggccaactac
cgctgggagagaaagttctttaactttgacagcctgccgcaggctctgatgtcgctgttc
gcgatgtactccaaagatagctgggtgcacatcatgtacaatggactggatgccgtggga
gtggaccagcagcctgtgatgaaccacaatgagtgggtgcttttttacttcatccccttc
atgataatgagcttctttctgctggacatgttcatcggcgtgatggtggacaccttccac
cagtgtcagcagaagcagaagaggctagacgaggcagaaggaacagcattgcatgtccgg
ggcagagcgtcatactcgcgcacgcggcggtgcgtccacgccctgtgcacgagccgctac
ctcgacctcttcatggccgccataatcgggatgagcgtcatggtcatggctctggaacac
tacggtgaacctcagtacatcactcagttgaccgagtgttgccactatgtgttcaccctc
atcctgatcggggaggtcctgctgaaggtcgtggcgttcggcggacgcaggttcttgcga
aatagttggaatctgctggacctggttgtcgtatttgtctccgtcttggggattgttgta
actgagatgaagatgacgcacaccattaccatcaatcccagcatcctccgagtcggcaga
gtcctcaaacttgcacaagttctgaaggccgaaaagatccgggttctgctgacaaccgtg
atcaaaacgctggcgcaggttggaaacatatgtctccttttcatattttttttctacgtc
tacgccgcgctgggagtggagctcttcggtgaactcgaatgcgtgaacaaggacctctgc
cggggcatcaacgaacacgtcaacttcgagagctttggaattgccctgctcgctctgttc
caggtttgcaccggggacaattggagcgtgattatgaaggacaccatgacccaggatcgg
caagactctaactacctcttgtgggtctcgccgatattcttcatttcattcgtgatcatg
gcccagttcgtcctcgtcaacctggtggtagctgtgattatgcaggccatggaggacagc
aaggaggtgaaggaggaacgcgttgcaaaggacctgctctcgctcactccagtggactct
acccaccgagaagaccggctctag
DBGET
integrated database retrieval system
