Cyclopterus lumpus (lumpfish): 117734816
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Entry
117734816 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117734816
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117734816
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117734816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
ANCHR-like_BBOX
Fez1
Motif
Other DBs
NCBI-GeneID:
117734816
NCBI-ProteinID:
XP_034394975
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All DBs
Position
8:19175299..19177520
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AA seq
487 aa
AA seq
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SNMANKEENLKESQRNIDVKEEPRDPGSLLPQDVFCDSCMDTPSKALKSCLTCXSYCEAH
LRPHLENDKFQNHRLVDPLRDIDCRTCERHQRPLERFCPADGCCVCLDCEDQEHEGHATA
SVGDARTRIETELQKQQEEISQKASAAEIAIGKLQSNNDLIKCRRFFVIVEQQFATLQTT
VEEAKIGVVDVLQGEQRKALRQAEGIQAHLEQRKTELMKTVAQRNKSDVDFLQEYSEWKK
GVADXYINRMDHLTSYVQVVTDSTQELCDLILSSYEDKVKCICNSGIKSQMPESEPSPLP
DPETREDFLKYTRSLTFDPNATHKFLRVTEDNRKLTNTSPWQHSYPDHPSRFEYWRQAIT
SDSLYLGRHYIEAELSGEGANVGVTYKSIDRKGEQSTSCITGNDFSWCVGRNSRGFFTWH
AGVETPLDVPDITRLGLYVDFNRGSVSFYXRLLHKYTADFIEPSYVTSWLSKKDNVVSLV
IEKLCNK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
tcaaacatggctaataaggaggagaacttgaaggagagtcagcgcaacatagacgtaaag
gaggagccgagggatcctggctcactgctcccacaagatgtattctgtgactcgtgcatg
gacacccccagcaaggccctcaaatcctgcctgacctgtnnttcttactgcgaggcccat
ctcagaccccatctggagaacgacaaatttcaaaaccatcgcctggtggatcctctccgc
gacatcgactgtcggacttgtgagcgtcatcaacgtcctctcgaacgcttctgtccggcg
gacggctgctgtgtgtgtctggactgtgaggaccaggagcacgaagggcacgcaactgca
tctgttggggacgcacggacacggattgagactgagctgcagaagcaacaagaagagatc
agtcaaaaggcctcagcagctgagattgcaattggaaagctacagagtaataatgactta
attaagtgcaggaggttttttgttattgttgaacagcagtttgccacgctgcagacaacc
gtggaggaggccaaaataggggtggtggatgtgctgcagggagagcagaggaaggccctc
agacaggcggagggcatccaagcacatctggagcagaggaaaaccgagttgatgaaaacc
gtggcccaaaggaacaagtctgatgtagacttcctgcaggagtattcagagtggaagaaa
ggcgtggcagatnngtacatcaaccgcatggaccacctgacctcttacgtccaggtagtg
actgattctacccaggagctgtgcgacctgatcctctcctcctacgaggacaaagtgaaa
tgtatctgtaacagtggtattaaatctcagatgccagaatctgaaccttctcccctgcct
gatcctgagacccgagaggactttttgaaatacacaaggagtttgacctttgacccaaac
gccacccataagttcctacgtgtaacggaggacaacagaaagctgaccaacaccagcccc
tggcagcacagctacccagaccaccccagtcgcttcgaatattggcgtcaggcaataacc
tcagacagcctgtaccttgggaggcactatattgaagcagagctgagtggggagggtgca
aatgtaggagtcacgtacaagagcatcgatcgtaaaggagagcaaagcaccagctgcatc
actgggaacgacttttcctggtgcgtgggaaggaacagccgaggtttctttacctggcac
gctggtgtagagacgccgttggatgtccctgatattacaagactcggcttgtatgtcgac
tttaaccgaggctctgtgtctttttatnngaggctgctccacaagtacacggctgatttc
atagagccctcatacgtcacatcttggctgtcaaaaaaagacaatgtagtttctctcgtt
attgagaaattatgtaacaaatga
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