Cyclopterus lumpus (lumpfish): 117734820
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Entry
117734820 CDS
T09199
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
clum04144
Endocytosis
clum04145
Phagosome
clum04148
Efferocytosis
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117734820 (rab5c)
04145 Phagosome
117734820 (rab5c)
04137 Mitophagy - animal
117734820 (rab5c)
04148 Efferocytosis
117734820 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117734820 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117734820 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117734820 (rab5c)
04031 GTP-binding proteins [BR:
clum04031
]
117734820 (rab5c)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117734820 (rab5c)
Endosome - Lysosome transport
117734820 (rab5c)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117734820 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
117734820 (rab5c)
Exosomal proteins of colorectal cancer cells
117734820 (rab5c)
Exosomal proteins of bladder cancer cells
117734820 (rab5c)
GTP-binding proteins [BR:
clum04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117734820 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
117734820
NCBI-ProteinID:
XP_034394979
Ensembl:
ENSCLMG00005015225
LinkDB
All DBs
Position
8:15885457..15895833
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKSEPQGGAGAAGRTRGGVDLQDAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggtggaccagcacggaccaacggcactgcagcaagcaacaagatctgc
cagtttaagcttgtgctgttgggggaatcagcggtgggaaagtccagcttggtgctgcgc
tttgtcaaaggccagttccacgagtaccaggagagcaccatcggagctgccttcctcacc
cagacggtatgtttggatgatacaacagtcaagtttgaaatctgggacactgcaggacag
gaacggtatcacagcttggcacccatgtactacagaggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgctaagaactgggtaaaggagctccag
cgacaagccagcccaaatattgttattgcactggcaggaaacaaagctgacctggccaac
aagagagccatagatttccaggaagcacaggcatatgcagatgacaacagcttgctcttc
atggagacttcagccaagactgcgatgaatgtcaatgagatttttatggctatcgccaag
aagcttcctaagagcgagcctcagggtggagctggcgctgctggacgaaccagaggcggc
gtggacctgcaggacgcggcgccgcagggcagaagtggccagtgctgtggtggcgggaac
taa
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