KEGG   Cyclopterus lumpus (lumpfish): 117734820
Entry
117734820         CDS       T09199                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04137  Mitophagy - animal
clum04144  Endocytosis
clum04145  Phagosome
clum04148  Efferocytosis
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117734820 (rab5c)
   04145 Phagosome
    117734820 (rab5c)
   04137 Mitophagy - animal
    117734820 (rab5c)
   04148 Efferocytosis
    117734820 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117734820 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117734820 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117734820 (rab5c)
   04031 GTP-binding proteins [BR:clum04031]
    117734820 (rab5c)
Membrane trafficking [BR:clum04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117734820 (rab5c)
 Endosome - Lysosome transport
    117734820 (rab5c)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117734820 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   117734820 (rab5c)
  Exosomal proteins of colorectal cancer cells
   117734820 (rab5c)
  Exosomal proteins of bladder cancer cells
   117734820 (rab5c)
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117734820 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 117734820
NCBI-ProteinID: XP_034394979
Ensembl: ENSCLMG00005015225
LinkDB
Position
8:15885457..15895833
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKSEPQGGAGAAGRTRGGVDLQDAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggtggaccagcacggaccaacggcactgcagcaagcaacaagatctgc
cagtttaagcttgtgctgttgggggaatcagcggtgggaaagtccagcttggtgctgcgc
tttgtcaaaggccagttccacgagtaccaggagagcaccatcggagctgccttcctcacc
cagacggtatgtttggatgatacaacagtcaagtttgaaatctgggacactgcaggacag
gaacggtatcacagcttggcacccatgtactacagaggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgctaagaactgggtaaaggagctccag
cgacaagccagcccaaatattgttattgcactggcaggaaacaaagctgacctggccaac
aagagagccatagatttccaggaagcacaggcatatgcagatgacaacagcttgctcttc
atggagacttcagccaagactgcgatgaatgtcaatgagatttttatggctatcgccaag
aagcttcctaagagcgagcctcagggtggagctggcgctgctggacgaaccagaggcggc
gtggacctgcaggacgcggcgccgcagggcagaagtggccagtgctgtggtggcgggaac
taa

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