KEGG   Cyclopterus lumpus (lumpfish): 117734926
Entry
117734926         CDS       T09199                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117734926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117734926
Spliceosome [BR:clum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117734926
 Complex B
    117734926
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 SPX Transformer Dsh_C
Other DBs
NCBI-GeneID: 117734926
NCBI-ProteinID: XP_034395167
LinkDB
Position
8:2707471..2716795
AA seq 467 aa
MADFEEFEKQLSENRQERERESDKHRSRSKGWGSRSREKSSRSREKSSRSQEKRSRSRDR
KSRDRRSSSRDHQKHRKKRTCKYWDVAPPGFEHITPMQYKALQAAGQIPPIALLATPTTT
TTTTTAGVAAAPPTQAPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQA
PSSPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIVFQGQSLKIRRPHDYRPLPGISEQ
PAFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKG
YAFCEYVDVGATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTSIIETPVTLQVPGLQR
LLNSCVATEVLCLLNMVMPEELVDDEDYEEILEDVREECCKYGGVRSIEIPRPVDGVEVP
GCGKIFVEYVSPADCQKAMQALTGRKFANRVVVTKYYDPDKYHRHEF
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggcggactttgaggaattcgagaagcagctgagcgagaaccggcaggagagagagaga
gaaagcgacaagcaccgcagccggagcaaaggctgggggagccgcagccgagagaagagc
agccgcagccgagagaagagcagccgcagccaagagaagaggagccgcagccgagatcgg
aagagccgcgaccgccggagctcctcccgggaccaccagaagcacaggaagaagaggacc
tgcaagtattgggacgtggcccctcctggctttgaacacatcactccaatgcaatataaa
gctctgcaagcggccgggcagataccgccgatagctctgctggcgacgcccaccaccacc
accaccaccaccaccgccggcgtggccgcggcgccgccgacacaagcgccgatcgtcggc
agccagatgacgagacaagccagacgcctctacgtgggaaacatcccctttggggtcact
gaggagtccatggcggagttcttcaacgctcagatgaggctcgcgggcctttcgcaagcc
ccgagcagccccgtgctcgccgtgcagatcaatcaggataagaacttcgctttcttagag
tttcggtccgtagacgagacgacgcaggcgatggcgttcgatggaatcgtcttccagggc
caatcgctgaagatcagacgaccgcacgactaccggcctttacccggcatctcagagcag
cccgctttccacgtcccaggcgtcgtctccacagtcgtccccgactccccccacaaactg
ttcatcggaggcctccccaactacctgaacgacgaccaggtgaaggagctcttgacgtcg
ttcgggccgctcaaagcgttcaatctggtgaaggacagcgccacgtcgctgtccaaaggt
tacgccttttgcgaatacgtggacgtcggcgccaccgatcaggcggtcgccgggctcaac
gggatgcagctaggcgacaaaaagctgatcgtccagagggcgagtgtgggagccaagaac
gccaacccgacctccatcatagagaccccggtgacgctgcaggtccccgggctccagcgg
ctgctgaactcctgcgtggccacggaggtgctgtgccttctcaacatggtgatgcccgag
gagctggtggacgacgaggactacgaggagatcctggaggacgtccgcgaggagtgctgc
aagtacggcggcgtgcgctccatcgagatcccccgacccgtcgacggagtggaagtcccc
ggctgcggaaagatcttcgtggagtacgtttctcctgccgactgtcagaaagccatgcaa
gctctcactggccgcaagttcgccaacagagtggtggtcaccaaatactacgatccggac
aagtatcacagacacgagttttga

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