Cyclopterus lumpus (lumpfish): 117734942
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Entry
117734942 CDS
T09199
Symbol
znf598
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117734942 (znf598)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117734942 (znf598)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117734942 (znf598)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf_C2H2_ZNF598
zf-C2H2_13
zf-C3HC4_3
Zn_ribbon_IFT122
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
117734942
NCBI-ProteinID:
XP_034395199
Ensembl:
ENSCLMG00005008975
UniProt:
A0A8C2XGI3
LinkDB
All DBs
Position
8:4123445..4131278
Genome browser
AA seq
925 aa
AA seq
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MASRTSKETEKHCVLCCQEVDIFALGKCDHPVCYRCSTKMRVLCDQKYCAVCREELDKVV
FVKNLAAFSSLPFQQFPCEKTHDIYFCNEKIYAQYRHLLLPECLRCSEPKVFSKFEELEY
HMRKQHELFCCKLCTKHLKIFSHERKWYNRKELARHRAHGDPDDTSHRGHPLCKFCDDRY
LDNDELLKHLRRDHYFCHFCDADGSQEYYSDYPYLSEHFRESHYLCEEGRCATEQFTHAF
RSEIDYKAHKAAAHSKNRAEARQNRHIDLQFNYTSRQTRRNEGMLSGEDYDEMRQTRGGR
GRPHGGQKSWRYSREEEDREVAAAMRASMAQCREEERGAIQERSAPKHCREERTERAEPE
EPKHRTGHIKPISKPPVRTMKSSNPGDEEDDFPALGATAAPTIVKPAPAMVTTAHAALKE
DDFPSLSTVAVASPMTPAYSAQPRKTSSFHEEDFPALVSKIRPLKHAAGTNSAWSNHTAV
AKPQTQPPPSSRPSPPLSSVSSGPQILSSSSNSSSLRRKKKLQENEISTRSAPPPPSDDD
IRGLTQQEFRSVPTMLEISSLLTVKGGKSKPSAVTSNPPNPTPIPDPFTSKANKKKKQQK
NMSAPSPPSSSMSGTTQTVNTISVETAAQKENVPEKSRNKPPSSAVTATLMSGLANGHPE
KSPPVRKEVVVITPHPKADPPLEQEEEFPALMTKNPPPGFKSSFPLKASAPAPVMPPPPP
GLGISAPKPPPGFTGIPLNSNVVEPAPPEVNPPPKVSSSGYLVPDDFNQRNLELIQSIRK
YLHNDESTFNQFKNYSAQFRQSVISAVQYHGSCKDLLGEDFNRIFNELLVLLPDTGKQQE
LLNAHGDSRALEKQSGAGGGKKNKNKKNAWQIPTTMANAAAELDCQVCPTCRQVLAPKDF
NSHKTMHIRDNEDFPSLQSISRIIS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagaaccagtaaagaaacagagaagcactgtgtcctgtgctgccaagaggtc
gacatcttcgccttgggaaaatgcgaccacccggtctgctaccgctgctccaccaaaatg
agagtgctgtgcgaccagaagtactgcgccgtctgccgggaagagctcgacaaggtggtg
tttgtgaagaacctggcggccttctcgtctctgcccttccaacagttcccctgtgagaag
acgcatgatatctatttctgtaacgagaagatctacgcccaatacaggcatctgctgttg
ccagagtgcctccgctgttcagaaccaaaggtcttctccaagtttgaggagctggagtat
cacatgaggaagcagcatgagctcttctgttgcaagctctgcacaaagcatctcaagatc
ttctcccatgagcgtaaatggtacaaccgtaaggaactggcacgccaccgagcacatgga
gatccagacgacaccagtcacagaggacacccgctctgcaagttctgcgatgaccgttac
cttgacaacgatgagctgctgaagcacttgcgcagggaccactacttctgccatttctgt
gacgcagatggttcccaggaatattacagtgattacccgtacctgagtgagcatttcaga
gagagtcactatctgtgtgaggagggccgctgtgccacagaacagttcacccatgcattc
cgctctgagatcgactacaaggcccacaaagctgcagcgcacagcaagaaccgagcagag
gcccgacagaaccgccacatcgacctgcagtttaactacacctcaagacaaacgaggaga
aatgaaggtatgctgtcaggtgaggactacgacgagatgcgtcagacacgaggaggaaga
ggaaggcctcatgggggacagaagagctggaggtattcccgagaggaagaggacagggag
gtggcagctgctatgagggcatccatggcacagtgtagagaggaggagagaggagcgata
caggagaggagcgctcccaaacactgcagggaggagaggaccgagagagccgaaccagaa
gagcccaaacacaggaccggacacatcaagccaataagcaaacctccagtaagaacaatg
aagagctctaatccaggggatgaagaagatgacttcccagctttaggagccacagctgcc
ccgaccattgtaaaaccagctcctgcgatggtaacaacagcccatgctgctttgaaggaa
gacgacttcccaagcctctcgactgtagcggtcgcgtcccccatgaccccggcttactct
gcccaaccgaggaagacttcctctttccacgaggaggatttccccgcgcttgtgtccaaa
atccggcccctcaaacatgcggctggcaccaactctgcttggtccaaccataccgctgta
gctaaaccccaaactcagcctcccccatcctccaggccttcccctcctctctcgtctgta
tcctctggccctcagatcctctcctcctcctccaactcctcatctttgcggaggaaaaag
aagttacaggagaatgaaatatctacccggtcagctcctcctcctccttctgatgatgat
atcagagggttgacgcagcaggagttccgctcggtgcccaccatgttggagatctcctct
ctactcactgtcaaaggaggcaaaagcaaaccctccgctgtgacctccaaccctccaaac
ccaacccccatccccgatccttttacctctaaagccaacaagaagaaaaaacagcagaag
aacatgtctgctccctctccgccctcgtcttcaatgtcggggacgacacagactgtaaat
acaatctctgtggaaacggcagcacaaaaggagaacgtccctgagaagagtcggaacaaa
cccccctccagtgctgtgacggcgactctgatgagtggattggctaacggacaccctgag
aagtcaccacccgttcgtaaggaggtcgttgtgataacccctcatcccaaagcagacccc
cctcttgagcaggaggaggagttccctgctctcatgaccaagaacccaccaccaggcttc
aagtcctctttcccgctgaaggcctcggccccggcccccgtcatgcccccacctccaccc
ggtctgggaatctcagcccccaagcctcccccgggattcactgggatccccctcaacagc
aacgtggtggagcctgcgccgcctgaagtcaacccgccccccaaggtgtcgagcagtggt
tacctggtgccagacgacttcaatcagaggaacctggagctgatccagtccattagaaag
taccttcacaacgacgagtcaacgttcaaccagttcaaaaactactctgcccagttcaga
cagagtgtgatatctgcagtccagtaccacggcagctgtaaggacctgctcggtgaagac
tttaaccgcatcttcaacgagctgctggttcttttgccggacactggcaagcagcaggag
ctcctgaacgcccacggggacagccgggcgctggagaagcagtcgggcgccggaggagga
aagaagaacaagaacaagaagaacgcctggcagatcccgaccacgatggcgaacgcagca
gctgagctggactgccaggtgtgccccacttgcagacaggtacttgccccgaaagacttc
aactcccacaagaccatgcacatcagggataatgaggacttcccttccttgcagtcaatt
agccgtatcatcagctag
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