KEGG   Cyclopterus lumpus (lumpfish): 117734965
Entry
117734965         CDS       T09199                                 
Symbol
elavl3
Name
(RefSeq) ELAV-like protein 3 isoform X1
  KO
K13208  ELAV like protein 2/3/4
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117734965 (elavl3)
   03041 Spliceosome [BR:clum03041]
    117734965 (elavl3)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     117734965 (elavl3)
Spliceosome [BR:clum03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    117734965 (elavl3)
SSDB
Motif
Pfam: RRM_1 RRM_5 BRAP2 RRM_3 RNA_bind
Other DBs
NCBI-GeneID: 117734965
NCBI-ProteinID: XP_034395224
Ensembl: ENSCLMG00005019269
LinkDB
Position
8:5712250..5723775
AA seq 366 aa
MVTIISTMETQVSNGPSGTSLPNGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGS
IGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSAS
IRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAE
EAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLD
NLLNASYGVKSSPTLFPRFSPITIDSMTSLAGVNLTGPTGAGWCIFVYNLSPEADESVLW
QLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKT
SKQHKA
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggttactataatcagcaccatggaaacccaggtgtccaacggtccaagcggaaccagt
ctgcctaatggcccagtcattagcaccaatggctccacagacgacagcaaaaccaacctg
atcgtcaactatctgcctcagaacatgacccaggaagagttcaaaagtttgttcggtagc
atcggagagattgaatcctgcaagctcgtcagagacaagatcacaggtcagagtttggga
tatggctttgtaaactatgtggatccaaatgacgcagataaggccatcaacacactcaat
ggtctcaaactgcagactaaaacaatcaaggtatcatatgcccggccaagctcggcatct
attcgtgatgccaacctttacgtgagtggactccctaaaaccatgagccagaaggacatg
gagcagctgttctcccaatacggtcgcatcatcacatctcgcatcctagtggaccaagtc
acagcaggcatatcacgaggagtgggcttcatccggtttgacaagcgaaacgaagccgag
gaggccatcaaaggtctgaacggacagaagcctttgggtgccgccgagcccatcactgtc
aagttcgccaacaaccccagccagaagacgggccaggccttactgactcagctgtaccag
actgctgcccgccgctacacggggcccctgcaccaccagactcagcgtttcagactcgac
aatttactaaacgccagctacggagtcaagagctctcccactctcttccccagattctcc
cccatcaccattgacagcatgaccagcctggccggggtcaacctcaccggtccaactgga
gccggctggtgcatctttgtgtacaacttgtcccccgaggcggacgagagcgtcctgtgg
cagctcttcgggcctttcggcgccgtcaccaacgtcaaggtcatccgtgacttcaccacc
aacaaatgtaagggctttggctttgtcaccatgaccaactacgacgaagccgccatggct
atcgcaagccttaacggctaccgcctgggcgaccgcgtgctgcaggtttccttcaagacc
agcaagcagcacaaggcctga

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