Cyclopterus lumpus (lumpfish): 117735019
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Entry
117735019 CDS
T09199
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117735019 (tmc5)
03037 Cilium and associated proteins [BR:
clum03037
]
117735019 (tmc5)
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117735019 (tmc5)
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117735019 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117735019
NCBI-ProteinID:
XP_034395305
LinkDB
All DBs
Position
1:complement(11366384..11377289)
Genome browser
AA seq
978 aa
AA seq
DB search
MTSYRSEGFFNPAYHDSETLEIDRLSPSKTPHTNPYARSDRADGHYSTGQTSGNVAVERV
PSGRWHEESSRGRESIPMGLISTHSGSPAWQHDLNHSMFQIPPDSQYDQSPPVRLSSAMS
GNMTMRWRGMTMRRMSMFPNGDPAHVAFTEDAIRNEMENEEQNLVKELVALSTRDRIHAI
RDLPISLDEKKHIRSQVLAFKSSRQSHQFTCFADFSENVSLSFRRCGYSISSARQSLELW
QGIMKEIGGKFGSSVLIYFVFLKWLLMFNIFSFLVNFGFITIPLLVYNPFSSIPPNVSFR
GLEILSGAGYFQHTVLYYGGYSNETLHVLADYNMQLAYFFTIAVYMLLCGITLIFSMDSS
FKKNYVLADPTSNSAWQLLCSWDFSITNERAVRQRKNNLRVQLKESLSEKAQRELLTLSE
KLKHFGVYLGSWLLSTGLAVGCGASIYYLCQYEQQQATDAANWSLLQEAETLLVPFVVSL
MNLVVPLFYSLFNKFEPYSSQRRQIYALVVRNVFLKMSILAVLCYYWMNVVAKKFSCWES
VVGQALYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLELIYAQTLA
WIGIYFSPLLPAIQIFKFLILFYLKKVSLIQNCQPPRRTGRAAQMQTIFIALLFFPFFVG
ALSMVAYTAWSLTPSEQCGPFRGLNSTFSVVGVWIDDLEEIAGSQWAVWIYQHVIRSEIF
YFLISLIIIVIMYIFWQVTQGRKQLIGLLRQQIVNEGKDKSFLLDKLQNLQTSQPDKRSK
QKNQRKHSKQRPDDRSSTGQSNSNVMVQALLARQQFEQEEERRSTGGVPVPSNASSTLIQ
AMLARQRADDQDEDKHSPFSSAFAQAAQARQRAEGRETDEYYSTGFSESRITTASIVTQS
MQARQRPEQDGADDAHDLPSSVSSVMMQVMQARLRAEEEDRPQRLPASPQNSAPAGSSAL
IQAMLARQQAQNEYDDGY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagaagcgaaggattcttcaaccctgcctaccatgacagcgagactctg
gaaattgataggttgtctcctagtaaaaccccccacactaacccctatgccaggagtgac
agggcagacggacattactccacgggtcagaccagcggtaatgttgctgtggagagagtg
ccatcggggcgctggcatgaggagagctctagggggagagaaagcatccccatgggtctc
atctcgacgcactcagggagtccggcgtggcagcatgacctcaatcacagtatgttccaa
atcccacctgactcccagtatgatcaatcacctcctgtccgcctttcttctgcaatgtca
ggtaacatgacaatgagatggaggggaatgacgatgagaaggatgagcatgtttcctaac
ggggatcccgcccatgtagccttcaccgaggacgccatcaggaacgagatggagaatgag
gaacagaacctggtcaaggagctcgttgccctgtcaacacgagaccgaattcatgccatt
cgggatcttccaataagcttagacgagaagaaacatatcaggagccaagtgctggccttc
aagtcttccaggcaatctcaccagttcacatgttttgcagatttctctgagaatgtgtca
ctgtctttccgcaggtgtggttacagtataagttcagccaggcagagcctggagctgtgg
caaggcatcatgaaagagattggtggcaagtttggctccagtgtcctcatctatttcgtg
ttcctcaagtggctgctcatgttcaacattttctccttcctggtcaactttggcttcatc
accatcccgctgctggtttacaaccctttttccagtatacctcccaatgtgagcttcaga
ggactggagatactatctggagctggttacttccagcatactgtcttgtactacggtggc
tacagcaatgaaaccctgcatgtcctggcggactacaacatgcagttggcctatttcttc
accattgcagtctacatgcttctgtgtggaattacacttatcttcagcatggacagctca
ttcaagaaaaactacgtactagcagacccaacttcaaacagtgcatggcagcttctctgc
agctgggactttagcattaccaatgaaagagcagtgagacagcgcaagaacaatctccgt
gtccaactcaaggagtctttgtcagagaaggcccagagggagttgctaaccctctctgaa
aagctgaaacactttggggtttatctgggttcctggctcctatccaccggcttggctgtc
ggatgtggagctagcatctattatctctgccaatacgaacagcagcaggcaacagatgct
gccaactggtctctgcttcaggaggcagagactctcctggttccctttgtggtgtctctg
atgaacctggttgtcccactattctactccctcttcaacaagtttgagccctactccagc
cagcgcagacagatctacgctctggtcgtcagaaacgtgtttctcaagatgtccattctg
gccgtcttgtgttattactggatgaacgtggtggcgaagaagttttcatgttgggagtcc
gttgtcggtcaggctttgtaccggctggtcattgttgatttcctttttctgatgttggga
tccttctttggagagtttcttagcaatgtgattgggacgagattgctacctcgtctgggg
gtaccagagtttgacgtagccagaaatgtccttgaactcatctatgcacagactctggcc
tggattggaatatacttctctcctctgctgcctgcaatccagatcttcaaatttttaatt
ttgttttacttaaagaaggtcagcctgatccagaactgccagcctccgcgacggacgggc
agagcagctcagatgcaaacaatctttattgccctcctcttcttccctttctttgtgggt
gccctgtccatggttgcatacactgcctggagcctgacgccctcggagcagtgcggccct
tttcggggactcaacagcaccttcagtgtggttggagtgtggatagatgatctggaggag
atcgctggttctcaatgggccgtctggatctaccaacatgtcatcagaagtgaaattttc
tactttcttatctcactcatcatcattgtcattatgtacatcttctggcaagtcactcag
ggtcgcaagcagcttattggtctactgagacaacagattgttaatgaagggaaagacaag
tccttcttgttagacaagctccagaacctccaaacatctcagcctgataaaagatccaaa
cagaagaatcaaagaaagcactccaagcagcgtccggatgaccgctcttcaaccggtcag
tccaactcaaacgtcatggttcaggcgttactcgcccgccagcagtttgaacaggaggaa
gagagacgcagcactggtggagtgcctgttccctccaacgcctccagcactctgattcag
gccatgttggcccgccagagagctgacgaccaggatgaagataaacactcgcccttctcg
agcgccttcgcacaggccgcgcaggccagacagagggccgagggtcgagagacggatgaa
tactacagcacaggtttctctgaaagccgcatcaccacagccagcatcgtcacacagtcg
atgcaagccagacagagaccagagcaggatggagcagacgatgcacatgacctgccgtcc
tctgtgtcgagtgtcatgatgcaagtcatgcaagccagactgagagcagaggaagaggac
aggcctcagcggctccccgcttccccacagaactcagctccagcaggctccagcgcgctc
atacaggccatgttggcccggcaacaggcccagaatgagtacgatgacggttactga
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