Cyclopterus lumpus (lumpfish): 117735033
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Entry
117735033 CDS
T09199
Name
(RefSeq) gap junction gamma-1 protein isoform X1
KO
K07616
gap junction gamma-1 protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117735033
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117735033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
IMUP
Connexin40_C
Motif
Other DBs
NCBI-GeneID:
117735033
NCBI-ProteinID:
XP_034395318
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All DBs
Position
8:16529411..16530868
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AA seq
485 aa
AA seq
DB search
MSWSFLTRLLEEIHNHSTFVGKLWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNSGQPGC
ENVCYDAFAPLSHVRFWVFQIILVAMPSLMYMGYAVNKIARIDESKGGAGSAAVRTGGGG
YTHRKPRKICFGARQHRGIEETEEDQEDDPMIYEVPEIEPPKRPRDPLQPAPKPKIRHDG
RKRIRDEGLMRVYVLQLVIRTLLEAGFLAGQYLLYGFHVTPVFVCSRQPCPHSVDCFVSR
PTEKTIFLRIMYGVTVLCLTLNIWEMLHLGIGTICDILRRRRCPPQEDEYQLGLLGTNGG
VEGSVGGTGPEAISEGGVGGDGAADYVGYPFSWNTPSAPPGYNIVVKPEQMPYTDLSNAK
MACKQNRANIAQEEQQQFGSNEDNFPTGGEARVALNKDMIQQAHEQLEAAIQAYSQQHRA
EEHLGDNQDDKPQSNIIQAQPQPQPQPQKERKHRFKHGKGGSSAGGSSSNSSSSKSGEGK
PSVWI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagcttcctcacgcggctgctggaggagatccacaaccactccaccttcgtg
gggaagctgtggctcaccgtgctcatcgtcttccgcatcgtgctcacggctgttggggga
gagtccatctactacgacgaacagagcaagtttgtctgcaactcgggccagccgggctgc
gagaatgtctgctacgacgccttcgcacctctatctcacgttcgcttttgggtcttccag
atcatcttagtggcgatgccttctcttatgtacatgggctatgccgtcaacaagattgca
cgaatcgatgaatccaaaggaggagcgggctctgctgcagttagaacaggaggaggaggc
tacacgcacaggaagcccaggaaaatctgcttcggagcacggcagcaccggggcattgag
gagactgaggaggaccaagaggatgatcccatgatctacgaggtgccagaaatcgagccc
ccaaaaaggccgcgggatccactgcaacccgcacccaaacccaaaatccggcatgatggg
cgcaaacgtataagagatgaggggctgatgcgggtctatgttttgcaactggtgattcgt
acactgctagaagcaggcttccttgcaggccagtatttgctgtatgggtttcatgtgacg
cccgtgtttgtgtgctcgagacaaccttgtccccacagtgttgactgctttgtgtcgcgg
cctacagagaagacaatcttcctgcgcatcatgtatggtgtcactgtcctttgcctcacg
ctcaacatttgggagatgctccatctggggatcggtaccatttgtgacattcttcgccgc
cggcgctgcccaccccaggaggatgagtaccagttgggattgctgggcaccaatggaggt
gtggagggatcagtaggggggacagggcctgaggcaatctctgagggaggggtgggtgga
gatggggctgcagactacgtcggttaccccttctcatggaacaccccatcagctccacct
ggctacaacattgtggtgaagccagagcagatgccgtacacggacctgagcaacgctaaa
atggcatgcaagcagaaccgggccaacattgcccaagaggagcagcagcaatttggtagc
aatgaggataactttcccactggaggggaggcccgtgtagctttgaacaaggacatgatc
cagcaagctcatgagcaactggaggcggccatccaggcctacagtcagcagcatcgggca
gaggagcatcttggggacaaccaggacgacaagccccaaagtaacatcatccaggcacag
cctcagccacagcctcagcctcagaaagagcgcaagcatagattcaaacacgggaaagga
ggcagcagtgcaggaggaagtagcagcaacagcagcagcagcaaatccggagagggtaag
ccctctgtatggatttaa
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