Cyclopterus lumpus (lumpfish): 117735073
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Entry
117735073 CDS
T09199
Symbol
hdac5
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 5
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117735073 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117735073 (hdac5)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117735073 (hdac5)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117735073 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
117735073
NCBI-ProteinID:
XP_034395384
LinkDB
All DBs
Position
8:11632108..11664391
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AA seq
1139 aa
AA seq
DB search
MLLHPTVSGLCAMLQTIYETESCFSSASADSHHQPLELLSGNKGSGTAMPTAVVEVKSSL
PSGMQSPVGTVSEQRGGGEGGGGPGEGPGGGGGGGPVDLRTESRVGSLSGGAAAVDTAIR
EQQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQEL
EQKRKLEQQRHEEQEKHRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLNKKEPGIGG
LNHSFSPKCWGAQHISLEQGSPPQSNTPGTPPSYKLPPLLGIYEGKDDFPLRKTVSEPNL
KVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSFCNSAPGSGPSSPNSSNSA
IANGNTGSVPNIQTELRSLHQTLGADGTLSPLNLYTSPSLPNISLGLPANTHITTSQALS
NQQEAERQAIQSLRGGGALTGKFLSTSSLPAGVGHEVETPPPSSHSAHSSLLQHVLLLEQ
ARQQTAMLAVPMYSQSPLVTAERGVSSGMRAVNKLPRHRPLARTQSAPLPQSPQALQQLV
VQQQHQHFLEKHYKMLSKGAELPRPPPTHPEETEEELTETNDMQEDDEGASLHRLQNEGS
DDSTPSSERLGVHVKCEEEYGSVHVKGESTESELDEEEEEDDILQLREGDEEERGSYTQA
LQQLGVFQSPLPHRPLGRAQSSPAATVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIHPEH
AGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKL
LGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFRVAAGELKNGFAVV
RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYSDPNV
LYISLHRYDDGNFFPGSGAPEEVGSGAGGGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMP
IAQQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEGGHD
LTAICDASEACVAALLGDPCDSVFQWPQEKPCPKAWASLERVIEIQNTHWSCLQSLSQTS
GHSLLDDPQGAQGQSEKDEAETVSAMASLSVDVDQPGSDPDNAETSRSTEEPMEEEPVL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcatcccacggtgtcaggattgtgcgccatgttgcagaccatctatgagacg
gagtcctgtttttcctctgccagcgcagacagccaccaccagcctctggagctcctgagt
ggcaacaagggctccggcactgccatgcccactgccgtggtggaggtgaagagcagcctc
ccatcgggcatgcagagcccagtaggaacagtgagtgagcagagaggaggcggagaagga
ggagggggtccaggagaaggcccaggaggaggcgggggaggtggcccagtggatctgcgg
accgagtctcgggtggggtctctgtctgggggcgcggcggcggtggacacggccataagg
gagcagcagctccagcaggaactcgtcctcctcaagcagcagcaggagctccagaagcag
ctgctgttcgccgagttccagaagaaacacgaagtgctcacgaggcaacacgaggtccag
ctgcaggagcacctgaagcaacaacaggagctgttggcggctaagcggcagcaggagctg
gagcagaagaggaagctggagcagcagaggcacgaggagcaggagaagcaccggcttgag
cagcagctgctgctgctgaggaacaaggagaagggcaaagagagtgccatcgccagtaca
gaggtgaagctgaagctgcaggagttccttctcaataagaaggagcccggcatcggcgga
ctgaaccattccttctctccaaagtgctggggagcccagcacatctctctggagcagggc
tctcctccgcagagcaacactccaggaactcctccctcatacaaactacccccgctgctg
gggatctacgagggaaaagacgacttcccactccgcaagacagtctcggagcccaacctg
aaggtgcgttcacggttgaagcaaaaggtggcagagaggcggagctctccactcctccgc
aggaaggacggaaccgttatcagcacgtttaagaagagagccatcgagatatcagtctcc
tctttctgtaatagcgctccaggttctggtcccagcagtcccaacagttccaactcggct
atcgccaatggcaacacggggtcggtgcccaacatacagactgagctgagatctctccat
cagacgctgggggctgatgggacattgagtcctctgaatctctacacctcgccctccttg
ccgaatatttccttgggcctccccgccaacactcacatcacgacctcccaggcactttcc
aaccagcaggaggctgagcgtcaagccatccaatcgctgcgagggggcggagctctaaca
gggaagtttctctccacatcctccctaccggcaggggtggggcatgaggtagagacaccg
ccccccagctctcattccgcccattcctcgttattgcaacatgtactactgctggagcag
gccagacaacagactgctatgctagctgtccccatgtacagccagtcgccgctggttacg
gcagagagaggcgtgtccagcggcatgcgggcggtcaacaagttgcctcgccaccggccg
ttggctcggacccagagtgcacctctgccccagtccccccaggccctgcagcagctcgtg
gtccagcagcaacaccagcacttcctggagaaacattacaagatgctatcgaaaggggcg
gaacttcccaggccgccgcccacccacccagaggagactgaggaggagctaacagagacc
aatgacatgcaggaggacgacgaaggagcaagcctacacaggctccaaaatgagggctca
gacgacagcacgccctcctccgagcggcttggcgtgcacgtgaagtgtgaggaggagtat
gggagcgtgcatgtgaaaggggagagcacagagagtgagctggatgaagaggaggaggaa
gacgacatcctccagctgagggagggcgatgaggaggagaggggcagctacacgcaggcc
ttgcagcagctgggcgtgttccagtccccgttgccccacagacctctgggaagggcgcag
tcctcccccgcggccactgtcaaccccatcaaacacctcttcaccaccgggcttgtgtat
gacagtctgatgctgaagcatcagtgtgtgtgtggcaacgctcacatccacccagagcat
gctgggagagtgcaaagcatctggtcccgactgcaggagacgggcctactaggccgctgt
gaaaggattcgggggcgtaaagcatctctggatgagatccagtccgtccattcagagttc
cacactctgctatatggaaccagtccgctgaatcgacacaaactggaccacaagaagctg
ctgggtccaatcagccagaagatgtatgctgttcttccctgtggaggaattggggtggac
agtgacaccgtgtggaacgagatgcactcgtcggcggcagtccgcatggcagtcggctcc
gtcatcgagctggccttcagggtggcggcaggcgagctgaagaacggcttcgcggtggtg
cgtccgccgggccaccacgccgaggaatccaccgccatggggttttgtttctttaattca
gtagccatcactgccaagctgctgcaacagaagctgggcgtgggcaagatcctcattgtg
gactgggacattcaccatggcaacggcacccagcaggccttctatagtgaccccaacgtc
ctctacatctccctccatcgctacgacgacggaaacttctttcctggcagcggagctcct
gaggaggtgggatcaggtgctggtggtggtttcaatgtgaacatagcgtggaccggagga
gttgagccgcctatgggggacgtggagtacctcacagcctttaggagcgtagtgatgccc
atcgctcagcagttcagtccagacgtggtcctggtgtccgcgggcttcgacgccgtggag
ggtcatcagtctcctctgggaggatacaacgtctccgccaagtgttttggtcagctaacg
cagctgctgatgggtctggcgggcgggcgcgtcgtcatggcgctggagggaggtcatgac
ctcacagccatctgtgacgcgtcggaggcctgtgtcgctgcgcttctgggagacccgtgt
gactctgtgtttcagtggcctcaagagaagccctgtccaaaagcttgggcctcactggag
agagtgatagagatccagaatacacactggtcgtgtctccagagtttgtctcagacaagt
ggccactcgctattggacgacccccagggggctcagggccagtcggagaaggacgaggcc
gagacggtcagtgccatggcctcgctcagcgtggacgttgatcagcccggctcagatcca
gacaacgcagaaaccagcaggtccacggaagagccaatggaagaagagcctgtgttgtaa
DBGET
integrated database retrieval system
