Cyclopterus lumpus (lumpfish): 117735123
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Entry
117735123 CDS
T09199
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03320
PPAR signaling pathway
clum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117735123 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
117735123 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
clum01004
]
117735123 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117735123 (slc27a1a)
Lipid biosynthesis proteins [BR:
clum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117735123 (slc27a1a)
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
117735123 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
HpaP
Motif
Other DBs
NCBI-GeneID:
117735123
NCBI-ProteinID:
XP_034395471
Ensembl:
ENSCLMG00005020230
LinkDB
All DBs
Position
8:complement(18188764..18197421)
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AA seq
648 aa
AA seq
DB search
MHNAASVSASLGSMGLLRLFGVSWSWSLAAGLGVYLGTKSWKYFYIAARTAKRDINGLYV
LLRVKMALWRYMRSESNIPAIFAQTVKRHPNKPALIYEATGETWTFTQLDELSNAVAHWA
RGQGWVSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRHDSLMHCIGASGSRAIV
FGAELADAMLEVSSSNSQSMLRFSTGDLSAEHLARLEAQPLDPILTSSPRHPPSPCVPHK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYFAFRMSPVDIIYDCLPLYHSAGNI
MGVGQCLIYGLTVVVKKKFSASRFWEDCIKYNCTIVQYIGEICRYLLSQPVRPSEKGHKV
RLAVGNGLRPSVWEAFTERFRVKQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLVRVDEDSMELVRDSRGLCVSCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAH
NVFKKNDSAYLSGDVLVMDDMGYMYFRDRSGDTFRWRGENVSTTEVEGILSSLLGQTDVA
VYGVAVPGVEGKAGMAAIADTTGNFDCNSFLQKVQQALPSYARPVFLRISPHVDTTGTFK
IQKTRLQREEFDPRLTTDQIYFLNSRAACYEAVDEELYNAIVEGRMSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcggcgagtgtctcagcctctctggggtccatgggactgttgcgtctcttc
ggggtgtcgtggtcctggagcctggcagcaggccttggggtttatctgggcacaaaaagt
tggaaatacttctacattgcggcacgcacagccaagagagacatcaatggtctctatgtg
ctgttgagagtgaagatggctttgtggcgctacatgcgcagtgaaagtaacattcctgcc
atattcgcccagacagtgaaaagacatccaaataaaccagcactcatctatgaggccacg
ggggaaacgtggacgttcacacagctggacgagctgtctaacgcggtggcccactgggca
agaggtcaggggtgggtctcaggcgacgtggtggccctcttcatggaaagcaggccgtta
caggtggcgctttggctcggcttggccaaggtcggggtggaagctgcactcatcaacttc
aacctccgccacgattccctcatgcactgtatcggggcgtcgggctctcgcgctattgtg
ttcggagctgagcttgctgatgccatgttggaagtcagttcctccaacagccagtccatg
ctgcggtttagtacgggggacctcagtgcagaacatctggcccgactggaagctcaacct
ctggacccaattttaacgtcttcacctagacatcccccttccccttgtgttccccacaaa
ggcatgaacgaccgcctattttatatttacacctccggcaccacaggactgcccaaagct
gccattgtagtacacagtcgctactacagaatcgctgcttttggctattttgcctttcgc
atgagtcctgttgacatcatctacgactgcctgcctctctaccactcagcaggtaatatt
atgggcgtcggtcagtgtctgatctatggcctcactgtggtagtgaagaagaaattctct
gccagccgattctgggaagattgcattaagtacaactgcactatagtgcagtacatcggg
gaaatctgccgctacttactatctcagccagtgcgaccatcagaaaaaggccacaaagtt
cggctggcagtgggaaacgggttgcgccccagtgtgtgggaggccttcactgagcgcttt
cgggtgaagcagattggcgagttctatggagcaaccgagtgcaactgcagcattgccaac
atggatggcaaggtgggagcctgtggattcaacagtcgcattctccccaacgtgtaccca
atccgtctggtgagggtggacgaggacagcatggagctggttcgtgacagccggggcctc
tgcgtgtcttgccgccctggggagccaggactactcgtgggtcgtatcaaccaacaggac
ccattacggcgtttcgatggctatgctaaccaggatgctacgaggaagaagatagctcac
aatgtcttcaagaaaaatgattctgcgtatctatcaggtgacgtgctggtgatggacgac
atgggctacatgtacttccgtgaccgcagtggagatacattccgctggcgaggagaaaat
gtctctaccaccgaggtggaaggtatactcagcagtcttctgggtcagacggatgtcgct
gtgtatggcgtggcagtgccaggtgtggaaggtaaggcaggcatggctgccattgcagac
accacagggaattttgactgcaacagtttcctgcagaaagtccagcaagctcttccttcg
tatgcgcggcccgtattcctgcgaatctctccacatgtggacaccacaggtacatttaaa
atccagaaaaccaggctgcagagggaggaatttgacccacgcctcaccactgaccagatc
tactttttgaactctagagctgcatgttatgaggcagtagacgaggagctatacaatgct
atagtggagggaagaatgtctctatga
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