Cyclopterus lumpus (lumpfish): 117735124
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Entry
117735124 CDS
T09199
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00310
Lysine degradation
clum00514
Other types of O-glycan biosynthesis
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117735124 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117735124 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117735124 (colgalt1a)
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117735124 (colgalt1a)
Glycosyltransferases [BR:
clum01003
]
O-Glycan biosynthesis
O-linked Gal type
117735124 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117735124
NCBI-ProteinID:
XP_034395472
Ensembl:
ENSCLMG00005020143
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All DBs
Position
8:complement(18161668..18168553)
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AA seq
610 aa
AA seq
DB search
MHGLACLPAALLALLLSGCAPARAYFAEERWSPESPLLAPRVLLALICRNSEHSLPYFLG
TIERLNYPKERMALWVATDHNKDNTTDMLRDWLVKMQSLYHYVEWRPKEEPEHYQNEDGP
KQWGDLRYEHVMKLRQVALESAREMWADYFMLADCDNLLTNPNVLWKLMNENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPIRKQLRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHSEYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDEADSFLHSL
LEVNVRNSPVMPSKYIRVPRKQPDKLGFDEVFMINLQRRTDRRERMMSALDKQGITCKVI
AAVDGKATNISEIHTMGIHMLPGYNDPYHGRPLTKGELGCFLSHYNIWKEIVERRLETSL
VIEDDLRFEIFFKRRLKNLMMEVEDEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADY
SYWTLGYMMSLQGAEKLLKAEPLKRILPVDEFLPIMFNKHPVSDYMEQFKTRDLKAFSAE
PLLVYPTHYTGDTGYISDTETSTVWDNDKIRTDWDRARSGKTGEQAEISTEAQNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggctcgcctgcctccccgccgccctgcttgccttgctgctgtccggctgcgct
cctgctcgggcatactttgcggaggagcgctggagccccgagtctccgctcctcgctccc
cgggtcctcctcgcgctcatctgcagaaactccgagcactctctgccgtatttcctcggt
actatcgagcgcctcaactaccccaaggagcgtatggctttgtgggtagcaactgatcat
aacaaggacaacaccacagacatgctgcgtgactggcttgtcaagatgcagagcctctac
cattatgtggagtggaggccaaaagaagaacccgaacattatcagaatgaagatggtccg
aagcaatggggagacctccgttatgagcacgttatgaagctacggcaagtagcactggag
tcagctcgtgagatgtgggcggactactttatgttggcggactgcgataacctcctcacc
aaccccaatgtgctctggaagctcatgaacgagaacaagaccatcatcgcaccgatgctt
gaatcccgtgcagcctattcaaacttctggtgtgggatgacctcccagggttactataag
cgcactcctgcctacatacccataagaaagcagttgcgcaagggctgttttgcagttccc
atggtccactctactttcttgatagaccttaggaaagaggcgtccaggcagctggccttc
cacccgccgcactcagaatacagctgggctttcgatgacatcattgtgtttgcattctcc
gctcggatggcagatgttcaaatgtttgtatgtaataaagagacatatggttacttccct
gtgccactgagatcccacaatactttgcaagatgaagctgacagcttcttgcactccttg
ctcgaggttaatgttcgaaattccccagtgatgccttccaaatacatacgtgtacctaga
aaacaacctgacaaactgggctttgacgaggtgttcatgataaacctgcagaggcggacc
gaccgccgagaacgtatgatgagcgcattggacaagcaggggattacttgtaaggtcatt
gcagctgttgatggaaaagcaacgaatatcagtgaaattcatactatgggcatccacatg
ctccctggatataatgacccctatcatggtcgcccgctgacaaagggagagctgggatgc
ttcctttctcactataatatctggaaagagattgtggagagacgcctggagacctccctc
gtgattgaagacgacctgcgcttcgagatcttcttcaaacgacgcttgaagaacttgatg
atggaggtggaggacgaaggattggactgggatctcatatacattggtcggaagagaatg
caagtggatcaccccgagaaagctgtgcctaatatacacaacttagtggaagcagactat
tcctattggacgctaggctatatgatgtcattacaaggtgcagagaagcttttgaaagca
gaaccacttaagaggattttgccagtagacgagtttcttccgatcatgttcaataaacac
cctgtgtctgattatatggaacagtttaaaaccagggacctgaaggcattttcagccgag
cctcttcttgtgtatccgactcactacacgggcgacacgggctacatcagcgacactgag
acctccacagtgtgggacaacgacaagatccgtacggactgggaccgagcacgctcagga
aaaactggggagcaggctgagatcagcactgaggcccagaactcggatgtgctccagtcg
cctttggatagtacggcgcgggacgagctatga
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