Cyclopterus lumpus (lumpfish): 117735244
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Entry
117735244 CDS
T09199
Symbol
cacna1ha
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117735244 (cacna1ha)
04020 Calcium signaling pathway
117735244 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117735244 (cacna1ha)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117735244 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117735244
NCBI-ProteinID:
XP_034395651
LinkDB
All DBs
Position
8:3284098..3403665
Genome browser
AA seq
2501 aa
AA seq
DB search
MTDGEGRVRFQYAECPEGREEVRLAIPTPFRNDAPGHDVDPGGGHDEEEEEEEEEAERRR
RNGAEWSPEVRERKDQEPELEVEVGPTFGVRVRAPIRDPDCVSEEEEQQPYPALAPVAFF
CLKQTTRPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFQPCEDVTCESEWCRILQVLDD
CIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSLDGHNASLSAIRTV
RVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCF
LGEDVRSMYNLSISPYYMSEEGEDSPFICSAPRENGMLRCHSVPPHAEGGAVCSLAAPLG
PAGVNGCVNWNQYYNVCRPGDFNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDA
HSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDSTLASY
SEPGSCYEEMLRYISHLYRKLTRRLQRIYSGWHSKRRKKVNPNGAGSNGGGNGHGHGSSR
GCGGLGPGSASWLRPIHNLLQHHQHQHCRLSNGGQHTISVADGEGAGGEGLEMKSLPAAR
VGNASGNGGGDASGDAQGGGMGALLGRLNGGMNYPTILPSFVCSYSSKTPPPHAKQCGPG
PDQHPPNHPASEHTETLSKLYQLMGQHSRQRLLYQLAGVVPSPLLLELLSCPLCARSLET
LELELGDLEGGRGEADGLHDFPQGVDLRGGRGRRRRRGVEECKNGAVRAWTGFRERLKRI
VESKYFNRGIMIAILVNTLSMGIEYHKQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGL
FGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLM
KTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLQTENGDTIPDRKNFDSLLWAIVTVFQ
ILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSES
DDEKKSDNFEEDEKVEQLRDTELKMYSLMMTANGHVDPRGSMAPPIIMRTAATPMPTPKS
SLGPESVLGEELAYREGVPQYGEVGLGFPDAGSIHAGSRRGSSASMDPLAYDQRSLSLSS
PGRRSPLAPRSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGGGEEEEEEEEEEEE
EGRECAGDAGGNNRLRPESLELLQASTLCPSITAEYGDCNGRTLTYDPNVNADPKDDSSP
DDDIDEDSSFWIWLKKELLNMKPHWCKEHEDWTLYLFSPESKLRGWCQSVISHKLFDHVV
LVFIFLNCITIALERPDIQLNSKERVFLSVSNYVFTVIFLAEMAVKVVALGFCFGKQTYL
QSSWNVLDGLLVFVSLVDILVSLAYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVV
ETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDMKNVTNKSDCLQANYRW
IRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNNNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQDQEEEETRLREEKRLKMIEKKRRSKENGGAEAKQRPY
YADYSPLRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPRYLEEVLKYCNYVFTCI
FVVEALLKLAAFGIQRFFKDRWNQLDIGIVALSIMGIALEELKMSSALPINPTIIRIMRV
LRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECTEH
NPCEGLSRHATFANFGMAFLTLFRVSTGDNWNGIMKDTLRECHKDERHCLSYLPLISPMY
FVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAMERERKLSATSDNS
SVGGAYVGPCPHSPGQEEEVHYGDLLSSRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEE
VELSPQHQHSGSVTSVRSQPCESRALLQVPDSSPVLPRQPPSLTLPRIAPPTPGPSPLAL
RRQVAVKLDFVESQQERPNSVHLPPLSPLSPQTTSPSLLPPPPPPPPSPSPSALPLPPCS
PSRFPPPSPSSLHPLLSSPSSLPPPPSSPSLLLPPPPSPRLPLRPASLRRPRPPSAVSLC
DPADEEVYHITSSARLRWRDEEDGGQEGRGKAGRSHSLSPYATPHSLNSSSSSPPPPPLP
PSSSRSALGLLGLADRDLRKVLSVDNQAFRDEPPSLSAGHPDDQRRHSIEVCLPQAGVAS
DDQHFAWEAHRSEKGGQAFPVRVQSVGGGHRKKKMSPPCISIHPPCEREHPRMASPPKSA
DGSTLLRRRTPSYDLSPHAPSNVADAPADSQTLHTPLHVPQRAPSPASTPTHSRTYTPPH
ASAPTPPHVPISPNIFIQPHAPLVPRPFSQTHSLSPAARHSSLSGEYIPLPQFTFDQPQS
RYMSGLSAGLSDADAATCSSPFDNRLGGGAGFSAKNRRTAQ
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagtgcgttttcagtacgcagagtgcccggaggggcgggag
gaggtgaggctcgccataccgacacccttcaggaacgacgccccgggtcacgacgtcgac
cctggaggaggccacgatgaggaggaggaggaggaggaggaggaggcggagaggaggagg
aggaatggagcggagtggagtcccgaggttcgggagcgcaaagaccaggaaccagagctg
gaggtggaagtcgggccgacgtttggagttcgcgtccgggctcccattcgggatccggac
tgcgtctccgaggaggaggagcagcagccgtacccggccctggcccccgtggccttcttc
tgcttaaagcaaaccaccaggccccgcaactggtgtctccgcgtcgtctgtaacccgtgg
ttcgagcacgtgtccatgctggtcatcctgctgaactgcgtgactctggggatgttccag
ccctgtgaagacgtcacctgcgagtcggagtggtgccgcatcctccaggtgttggacgac
tgcatcttcgctttcttcgccgtggaaatggtcatcaagatggtggccctgggaattttt
ggccccaattgttaccttggcgacaagtggaaccagctggacttcgtcatcgtcatggca
ggggtgatggagtactctctggacggccataacgccagtctgtccgccatccgcaccgtc
cgggtgctccggcctctgcgggccatcaacagagtaccaagcatgcgcatcttggtcaca
ctgctgttggacacccttcccatgctgggaaacgtcctcctcctctgcttctttgtcttc
ttcatcttcggcatcgtgggagtccagctgtgggcggggctactgcgcaaccgctgcttc
ctgggagaggacgtcagatcaatgtacaacttgtccataagtccttactacatgtcggag
gaaggagaagacagccctttcatctgctcggctccccgcgagaacgggatgctgcgctgc
cacagcgtgccgccccacgccgagggcggggccgtctgctcattggccgctccgctcgga
ccggccggcgttaacggctgcgtcaactggaaccagtactacaacgtgtgccggcccggg
gacttcaacccgcacaagggagctgtcaactttgacaatatcggctacgcctggatagcc
atattccaggtcatcacactggaaggatgggtagatatcatgtactatgtcatggacgct
cactccttctacaattttatatattttatactgctcattatcgtgggctctttcttcatg
atcaacttgtgcctcgtggtcatcgccacccagttctccgagacgaagcagcgggagaac
gccctgatgagggagcagcgcgcccgctacatgtccaacgactccacgctggccagctac
agcgagccgggctcgtgctacgaggagatgctgcgctacatcagccacctgtatcgcaag
ttgacgcgcaggctgcagaggatatactccggatggcacagtaaaaggcgtaaaaaggtg
aatcccaacggcgccggcagtaacggcggggggaacggccacggccacggctccagcagg
ggctgcggaggcttaggcccgggcagcgcctcgtggctgagaccgatccacaacctcctg
cagcaccatcagcaccagcactgtcgcctcagcaacggggggcagcacaccatcagcgtg
gcggacggggagggggcgggaggggaggggctggagatgaagtcgctcccagcggcgcgc
gtggggaacgcaagcggaaacggcggcggcgacgcgtccggcgacgcccagggcggcggc
atgggggcgctgctgggccggctcaacgggggcatgaactaccccaccatactgccgtcg
ttcgtgtgcagctacagcagcaagacgccgcccccccacgccaagcagtgcgggcccggt
ccggaccagcacccgccaaaccacccggcgtcggagcacacagagacactcagcaagctc
taccagctcatgggacagcacagtcgccagaggctgctgtaccagctggccggcgtggtg
cccagcccgctgctcctggagctgctcagctgccccctgtgcgcccgcagcctggagacc
ttggagctggagctgggagacctggagggaggccggggagaggcggacggactgcacgac
ttcccccagggggtggatctgagaggcgggcgaggtcggcgccgacggcgaggggtcgag
gagtgcaagaacggagcggtgcgggcctggacgggcttcagggaacggctgaagaggatc
gtggagagcaaatacttcaaccgggggatcatgatcgccatcctggtcaacacgctcagc
atgggcatcgagtaccacaagcagcccgaggagttgaccgatgtgttggagatcagtaac
atcgttttcaccagcatgttcgtgctggagatgggcttcatgctgctggctttcggcctg
tttggatacatcaggaacccgtacaacatcttcgacagcatcattgtgatcatcagtgtg
tgggagatcatcggtcaagcagacggcgggttgtcggtgctgcgtacgttccgtctgctg
cgggtcctgaagctggtccgcttcctgcccgccctgaggagacagctggtggtgctgatg
aagaccatggacaacgtggccacgttctgcatgctgctgatgcttttcatcttcaccttc
agtatactgggaatgcatctgttcggctgtaaattcagtctccagacggagaacggagac
accatccccgaccgcaagaactttgactctctgctctgggccatcgtcactgtattccag
attcttacccaggaggactggaatgtggtgttgtacaacggcatggcctccacctctcca
tgggcggcgctctacttcgttgccctcatgacgttcggcaactatgtgctcttcaattta
ctcgtggccatcttggtcgagggcttccaggctgagggggatgctaatcggtcggagtcg
gatgacgagaagaaatctgacaacttcgaggaggacgagaaggtagaacagctcagagac
accgagctaaagatgtactctctgatgatgacggccaacggtcacgtcgacccgcgcggc
tcgatggctcctcccataatcatgcgcacggccgccacccccatgcccacccccaagagc
tccctgggcccggagtcggtcctcggagaggagctcgcgtacagggagggggtgcctcag
tacggcgaggtgggactgggcttccccgacgccgggagcatccacgcgggctctcgccgt
ggaagctccgcctccatggaccctttggcctatgaccagcggtctctgagcctctcgagt
cccggccggcgctcccctctcgccccccgctcgtggggaagccggcgctccagctggaac
agcctggggagagcgccgagcctcaagaggcgagacaccagcggggagagggagagcctg
ctgtctggggagggcggagggggggaggaagaggaggaggaggaggaggaggaggaggag
gaaggccgggagtgcgccggggacgccggggggaacaaccgactgcgtccggagtccctg
gagctgctgcaggcgtccacgctctgcccttccataacagcggagtacggggactgtaac
ggccggaccctgacctacgaccccaacgtgaacgccgaccccaaggacgactcctcgccg
gacgacgacatcgacgaggacagttctttctggatctggctgaaaaaggagcttctgaac
atgaagccccactggtgcaaagagcacgaagactggacgctgtacttgttctctccagag
agcaaactccgtgggtggtgccaaagtgtgatctcgcacaaactgttcgaccacgtggtt
ctggttttcatcttcctcaactgcatcaccatcgctctggaaagacctgatatacagctc
aacagcaaggagcgagtgtttctgagcgtgtccaactacgtgttcactgtgatcttcctg
gcagagatggccgttaaggtcgtagctctgggtttctgcttcgggaagcagacgtacctc
cagtccagctggaacgttctggacggtttgctggtgttcgtgtctctggtcgacatcctg
gtctccctggcgtacaccggcggaaaccggatcctgggcatcctccgggtcctgcgcctc
ctgcgaacgctccgcccactgagggtgatcagccgagctccgggactgaagctggtggtg
gagacgctcatcacctctctcagacccatcgggaacatcgtcctcatctgctgcgccttc
ttcatcgtctttggcatcttgggggttcagttgttcaaagggaagttctaccactgtgag
ggcctggacatgaagaacgtcaccaacaagtcggactgcctgcaggccaactaccgctgg
atccgcaggaagtacaacttcgacaacctgattcaggctctgatgtctctgtttgtgctg
tcctgtaaggacggctgggtcaacatcatgtacgacgggctggacgccgtgggagtggac
cagcagcccgtgaggaacaacaacccctggatgctgctctacttcatctccttcctcctc
atcgtcagcttcttcgtcctcaacatgtttgtcggcgtggtggtggagaacttccacaag
tgccggcaggaccaggaagaggaggagacccgcctgcgggaggagaagaggctcaagatg
atagagaaaaagcgcaggagtaaggagaatggaggagctgaggccaagcagaggccttac
tacgcggactactcccccctgcgtctgtccatccacacgctgtgcaccagccactacctg
gacctcttcatcaccttcatcatctgcatcaacgtcttcaccatgagcatcgagcactac
aaccagccgcggtatctagaggaggttctgaagtactgtaactacgtgtttacctgcatc
ttcgtcgtcgaggccctgctcaaactggcggcgttcggcatacagcgcttcttcaaagac
aggtggaaccagctggacatcggcatcgtggcgctgtccatcatgggcatcgccctggag
gagctgaagatgagctcggcgctgcccatcaaccccaccatcatcagaatcatgagggta
ctcagaatagcacgagtgctgaagcttctgaagatggccacagggatgcggtctctgctg
gacaccgtcatgcaggcgctgccgcaggtggggaatctgggcctcctcttcatgctgctc
ttcttcatctacgctgcgctgggagtggagctgttcggcaaactggagtgcactgaacac
aacccgtgtgagggcctgagtcgccacgccaccttcgccaactttgggatggccttcctc
acactgttccgagtgtccacgggagacaactggaacgggattatgaaagacacgttgagg
gagtgtcacaaagacgagcgccactgtctctcctacctgcctctgatctccccgatgtac
ttcgtcacgttcgtgctcatggcccagttcgtgctggtcaacgtggtcgtggcggtcctg
atgaaacacctggaggagagcaacaaggaggcgaaagaggatgcggagatggatgcagag
atcgccttggagatggcgatggagagggagcgcaaattaagcgcgacgtccgacaacagt
tcagtgggaggagcctacgtcgggccgtgtccacactcacctgggcaggaggaagaggtg
cactacggggacctgctgtcgtcaaggaagatgtccgtatccaggatgcactctctgccc
aacgacagctacatgttccggcccgtgcggcccgccagcgccccctaccctctggaggag
gtggagctcagcccccagcaccagcattcaggctcggtgacgtcggtccgctcgcagccg
tgtgagagccgcgcgctgctgcaggttcctgactcctcccccgttctcccccggcagcct
ccctccctcaccctgccccgcattgccccgcccacgcccggcccctccccactggccctg
cgcagacaggtggcagttaaattggattttgtggagtcgcaacaggagaggcccaactcg
gtccacctgcctcccctttctcccctctctcctcagaccacctccccatctctcctgcct
cctcctcctcctccccccccctccccctcgccctcggccctccctctaccaccctgctct
ccttcccgcttccctcctccctctccgtcctctctgcatccgctgctgtcctccccctct
tccctccctcctccgccgtcatccccctcgcttcttctccctccgcctccctcgccccgc
ctccccctgcgccccgccagccttcggagacctcgaccgccctcggccgtctccctctgc
gacccggcggatgaggaggtgtatcacatcaccagctccgcccgcctcaggtggagggac
gaggaggacgggggtcaggagggcagagggaaggccggccgcagccactccctctccccc
tacgccacgccacactctctcaactcctcctcctcctcccctcctcctcccccgctgccg
ccttcctcctcgaggagcgcgctcggtctgctcggactggcggaccgcgacttgaggaag
gttctgagcgtcgacaaccaggccttccgggacgaaccgccatcgctgtctgccggtcac
cctgacgaccagcggcgccactccatcgaggtctgcctcccgcaggccggcgtcgccagc
gacgaccagcactttgcgtgggaggcccaccggtcggagaaaggcgggcaggcgtttccc
gtgagggtgcagtcggtcgggggcggccaccggaagaagaagatgagccctccgtgtatt
tccatccacccgccctgtgagagggaacacccccgaatggcctcgcccccaaaatcggcc
gacgggagcacgctgctgagacgcaggacgccgtcctacgacctgagcccgcacgcgccg
tccaacgtggcagacgccccggcggattcgcagacgctgcacacgcccctccacgtgccg
cagcgggcgccctcgccggcgtccaccccgacgcactctcggacgtacactccgcctcac
gcgtccgcaccgacgcccccgcacgtccccatcagcccgaacatcttcatccagccgcac
gcacctctcgtcccgaggcctttctcgcagacgcactccctctcccccgcggcgaggcac
tcctcgctctcgggggagtacatccccctcccccagttcaccttcgaccaaccgcagtcc
agatacatgagcggcctgtcggccggcctgtcagacgccgacgcggccacctgctcgtcg
cccttcgacaacagactgggaggcggtgcggggttcagcgcaaagaatcggaggaccgcc
cagtga
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integrated database retrieval system
