Cyclopterus lumpus (lumpfish): 117735313
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Entry
117735313 CDS
T09199
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117735313 (ush1ga)
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117735313 (ush1ga)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
RGCC
Motif
Other DBs
NCBI-GeneID:
117735313
NCBI-ProteinID:
XP_034395737
Ensembl:
ENSCLMG00005015171
LinkDB
All DBs
Position
8:19168373..19173267
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AA seq
472 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAFHGNLEALRLIAARGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDTI
ATKQTGLNTKLVGKMKDRAFRDAERRIKECVKMQKKHHERMERRFHKETSEASASDVMSF
SSYNSSSISHKLHHLNAATVSVPYSQATLHATNRGKTKIQRKLDKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKERGRRNVRDMFTRENYDAISRAISEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDIGGRDEDSADRSGNDVRLRSRLHH
YPGADEDSIGSARSLQERNVEELPWEEVELGLDDDDEADTSPLEVFLATQSMGDFFSIFK
REKIDLEALLLCSDPDLKSIHIPLGPRKKILDACKRRLETVEDPDRIEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggatggctacctggacctgctgaaggaggcg
actcggaaggatctcaacgcgccggatgaggatggcatgacaccgacgctgtgggctgct
tttcacggcaacctggaggctctgcggctgatcgcggcgaggggaggaaaccctgacaag
tgtgacatatgggggaacacgccgctccacctggcagctgccaacggtcacctcaactgc
ctcttcttcctggtgtccttcggcgccaacatttggtgcctggacaacgactaccacacg
ccgttggacatggccgccacgaagaatcacatggactgcgtccgctacctggataccatc
gccaccaagcagacaggcctcaacacgaagctggtcggcaagatgaaggaccgggcgttt
cgcgatgccgagcggcggatcaaggagtgtgtgaagatgcagaagaaacaccacgaacgc
atggagcggagatttcacaaggagacctctgaggcttccgcgtcagacgtcatgagcttt
tccagttacaacagcagctctattagccacaagctgcatcacttgaacgcagccacagtc
agtgtgccatattctcaggctactcttcatgccacaaaccgagggaagacaaagattcag
aggaagctggataagaggaagcaaggagatgggacatttaaaatctacgaggatgggagg
aagagtgtgcgctccctctccggacttcagctgggcaacgatgtcatgtttgtcaaacag
gggacctacgtcaacccaaaggaacgtggccgtcgcaatgtccgtgacatgtttaccagg
gaaaattacgatgccatttcacgtgccattagtgagccggacctccacgggcccgatgtg
gactactcggagatcagcactgactcaggacatgattccctgttcaataggcccggtctg
ggcaccatggtctttcggaggaactatgtgagtggggggatgtttgacatcggtggtcgg
gatgaggacagcgcagaccggtcaggcaatgatgtgcgtttgcgcagtcggctgcatcat
tacccgggtgcagatgaagacagcatcggcagtgcacgcagccttcaagagaggaatgtg
gaggagctgccctgggaagaagtcgaattagggctggacgatgacgatgaggctgacacg
agccctctggaggtcttccttgccacacagagtatgggtgacttcttctccattttcaag
agggagaagattgaccttgaagccctgttgctgtgctccgatcctgaccttaagagtatt
cacatccccttaggaccaaggaaaaagatcctagatgcctgcaagagacggctggagacc
gtagaggacccagaccgcattgaggacacagaactgtga
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