Cyclopterus lumpus (lumpfish): 117735315
Help
Entry
117735315 CDS
T09199
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04137
Mitophagy - animal
clum04144
Endocytosis
clum04340
Hedgehog signaling pathway
clum04350
TGF-beta signaling pathway
clum04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117735315 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117735315 (smurf2)
04350 TGF-beta signaling pathway
117735315 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117735315 (smurf2)
04137 Mitophagy - animal
117735315 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
117735315 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117735315 (smurf2)
04121 Ubiquitin system [BR:
clum04121
]
117735315 (smurf2)
03029 Mitochondrial biogenesis [BR:
clum03029
]
117735315 (smurf2)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117735315 (smurf2)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117735315 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
117735315 (smurf2)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117735315 (smurf2)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117735315 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117735315
NCBI-ProteinID:
XP_034395742
Ensembl:
ENSCLMG00005016605
LinkDB
All DBs
Position
8:13768605..13806524
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCKYQRLDLN
KLSPNDSDTVRGQIVVSLQSRDRIGTGGSVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTVLPPINGDQRIPERRVR
SQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCE
ELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPSPSPNGSRGGIE
SQNVSRQNQLKDQAQQALVSPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIS
VTQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DINDWKSNTRLKHCTAESNSVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTLHQIDASTNNLPKAHTCFNRIDIPPYEQYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaacggccccgtgaagctgcgattaacagtcctctgc
gccaaaaacctggtgaagaaggacttcttccgcctccctgatccctttgccaaggtcgtt
gtggacggttcggggcagtgccactcgacagacactgtgaggaacacacttgaccccaag
tggaatcaacactatgacctatacatcggaaaatccgactccatcaccatcagcgtgtgg
aatcacaagaagattcacaagaagcaaggtgccgggttcctgggctgtgtccgccttctg
tccaacgccatcaaccgccttaaagacaccggctgtaagtaccagagactagacttgaac
aagctgagtcccaatgacagcgacacggtcagaggccagatagtggtgagcctgcagtcg
agggaccggatcggcaccgggggctccgtggtggactgcagtcggctgtttgacaatgat
ctccccgatggttgggaggagaggaggacggcgtccgggcgaatccagtacttgaaccac
atcacacgcaccacacagtgggagaggccgaccaggcccgcgtcagagtactccagccct
ggccggcctctcagctgcatcgtggacgagaacacgcccgtcagcacaaacggggccacg
cccaccacagtgttgccgcccatcaacggtgaccagcggatcccggagagacgggtccgc
tcccagcggcaccgcaactacatgagcagaacccacctgcacacgcccccggacctccct
gagggatacgagcagaggaccacgcagcaaggccaagtgtacttcctccacactcagacg
ggtgttagcacgtggcatgaccccagagtaccaagagatctgagtaatgtgaactgtgag
gaactgggtcctctacctcctggatgggagatccggaacactgccactgggagggtttac
tttgtcgaccacaacaaccgaaccacgcagttcacggacccgcgcctctccgccaacctg
catctcgtgctcaatccaagtcccagtccaagccccaatggttctcgcggaggcatcgaa
agtcagaatgtcagtcgtcagaaccagttgaaggatcaggcccagcaggctctggtgtcc
cccggtcagctcccagaggaggccgagtgcctcacggtgcccaagtacaagagggacctt
gttcagaagctcaagatcctccgccaggaactgtcccagcagcagcctcaggccggccac
tgccgcatcgaggtgtcccgcgaggagatcttcgaggagtcgtatcgccaagtgatgaag
atgaggccgaaggacctgtggaagcggctaatggtgaagttcagaggggaggaggggctc
gattatggaggagtggccagggagtggctctacctgctgtcgcacgagatgctgaacccg
tactacggcctgttccagtactcccgcgatgacatctacacactgcagataaaccccgac
tctgccgtcaaccccgagcacttgtcgtactttcactttgttggccgcatcatggggatg
gcggtgttccacggccactacatcgacggaggcttcacgctgcccttctacaaacagctg
ctgggtaaacccatcaccctggacgacatggagtcggttgaccctgacctgcacaacagc
ctcgtctggatcctggacaatgacatcacaggtgtcctggaccacaccttctgcgtggag
cacaatgcttacggggagatcatccagcatgagctcaagcccaacggcaagagcatctcc
gtcacccaggacaccaagaaggagtacgtgcggctctacgtcaactggcgtttcctgcga
ggcatcgaggcccagttcctggccctgcagaagggcttcaacgaggtcatcccccaacac
ctgctcaaggctttcgacgagaaggagcttgagcttatcgtatgcggcctgggtaaaatc
gacatcaacgactggaagtccaacacgcgactcaagcactgcaccgcggagagcaacagt
gtcaagtggttctggaaagccgtggagtccttcgacgaggagcgcagggcccggctgctg
cagttcgtcaccggctcctccagagttcccctgcaaggcttcaaggccctccaaggtgct
gctggcccacgactctttactctccaccagattgatgccagcaccaacaacctgcccaaa
gcccacacctgttttaaccggattgacattcctccctacgagcagtatgacaaactgtac
gacaagttgctcaccgccatcgaggagacgtgcggcttcgctgtggagtga
DBGET
integrated database retrieval system
