Cyclopterus lumpus (lumpfish): 117735332
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Entry
117735332 CDS
T09199
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03030
DNA replication
clum03410
Base excision repair
clum03420
Nucleotide excision repair
clum03430
Mismatch repair
clum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117735332 (pold1)
03410 Base excision repair
117735332 (pold1)
03420 Nucleotide excision repair
117735332 (pold1)
03430 Mismatch repair
117735332 (pold1)
03440 Homologous recombination
117735332 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117735332 (pold1)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117735332 (pold1)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117735332 (pold1)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117735332 (pold1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117735332 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
117735332 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
117735332
NCBI-ProteinID:
XP_034395768
Ensembl:
ENSCLMG00005007102
UniProt:
A0A8C2XF72
LinkDB
All DBs
Position
8:7035142..7048782
Genome browser
AA seq
1105 aa
AA seq
DB search
MDHKRRNGGPYKGGASQAKRGKTTGEWEDSPSQFEEELSMFDEAEMEAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPIAPSLDPLSDTLVFQQIDLDYYLGATVAGMPGQLQEKVPIIRM
FGVTDSGNSVCCHIHGFAPYFYVPAPSGFTSDDLGEFKRELNSVVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRSLDFLRITMAMPRLIAPAKRVLEQGFKFGHFPINGYQSYEAN
IDFEIRFMVDSDVVGCCWIELPKNKYRVREEKNMGDTDSRYPGKVSLCQYEVDVGWTDFI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRATVLKAN
LFSHLGRVRNMKSVLRDQNFQSKQMGRRENKITNIEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKPEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSPERQSLSPEDFIKTPTGDTFVKSSVRKGLL
PEILENLLSARKRAKTELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVREAMDIGT
KAAEWISSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSASADMHEKMDCKGIETVRRDN
CPLVANLINTCLQRILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIFVLENTIPIDTQY
YLEQQLSKPLLRIFEPILGESKAENVLLKGDHTRCKTVLTSKIGGLMAFAQKRSTCIGCK
AVLKTDAAVCNFCKKKESELYQKEIYHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSNLVNRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggaccataaaagacgcaatggtggcccttataagggtggtgcgtcccaggccaaaagg
ggtaaaacaactggtgaatgggaagacagtccgtcacagtttgaagaggaattgtccatg
tttgatgaagcagagatggaggcagaggagatggaggggcaggcaggccatgacgttatt
cccgtaggtgacctcttctcagcagacctaaaccctcgttggcggcggcctattgcccct
tcactggacccattatcagatacattggtgtttcagcagattgatcttgactattattta
ggggcaacagtggctggcatgccgggtcagttacaggaaaaagtcccaatcattcggatg
tttggggtgacagacagtggcaacagtgtgtgttgccacatccacggctttgccccttac
ttctatgttccagcaccaagtggtttcacatctgatgacctgggtgaatttaaaagagag
ttgaactctgttgtcttgaaggacatgcgatccaataaggacaacatctctgtcacagtg
ttggctgtggacatcacccgcaaagagagcatgtatggttaccatggaaaacgcagtctg
gattttttgcggataactatggcaatgcctcgtctcattgccccagcaaagagagtgctg
gagcagggcttcaagttcggacatttcccaattaatggctaccaatcctatgaggccaac
atagactttgagataaggtttatggtggatagtgatgtggtgggatgctgctggattgaa
cttcctaaaaacaagtacagagtgcgtgaagagaagaacatgggggacacggattctcgg
tacccaggcaaggtgtccttgtgtcagtatgaggtggatgtgggatggacagatttcata
agtcaccctgcagagggagactggcagaggattgctccactcagggtgctcagctttgac
attgagtgtgcaggaagaaaaggaatcttcccagaagcagacaaagaccctgtgattcag
atagcgtcgatggtgcagcggcagggtgagacggagcccttcattcgcaccgtgttcact
ctccagtcctgtgccagcattgtgggctcacagatactgtgctttacacaggagaaacag
ctactgcagagctgggcagagtttttgaggactgtggacccagacatcatcactggatac
aacatccagaactttgactttccctacttgctcaacagggcaactgttttaaaggcaaat
ctcttttcccatcttggccgagtgcgaaacatgaagtcagtcttgcgagaccaaaacttc
cagagcaagcagatgggtcgccgagagaacaagatcactaacattgagggccgggttcag
tttgatctactgcaggttctcctcagggactataaactgcgctcgtacacactgaacgcc
gtcagtttccacttcctgcaagaacagaaagaggatgtgcagcactccatcatcactgat
ctgcagaatggaaacgaacagacacgtcgacggttggctgtctactgcctcaaagacgcc
taccttccgctgcgcttgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgaccggtgtgcctctcacctacctgctctcaagaggacagcagatcaaagtcgtc
tctcagctcctgcgacaggccatgaaacaggacctggtcatgcctgttgtaaagccagaa
ggaggagaagactacactggagcgactgtcattgagccagagaaagggtattacagcgta
cctattgccaccctggatttctcctccttgtatccgtccatcatgatggctcacaatctg
tgctacaccaccttactgcagaagggctcaccggagagacagagcctttcaccagaggac
ttcatcaagactccgactggcgatacgtttgtgaagagttctgtaaggaaaggacttcta
cctgagatcctggagaacctgctgtctgccaggaagagggccaaaaccgagctaaagaag
gagactgacccttttaagaggcaggtgctggacggccgacagctggccctcaaaatcagc
gcaaactctgtctatggcttcactggtgctcaggtgggcaagctgccttgcttagagatc
tcacagagcgtcacaggttttggaagacagatgattgagcaaaccaaacaactggtggag
tccaagtacaccatttccaatggttaccaagctgatgccaaggttatttatggggacaca
gattccgtcatggttaaacttggagttgccacagtgagggaggcaatggacattggcacg
aaggcagcagagtggatttcgtcccatttcacaccgcccatcaaactggagtttgagaag
gtgtactacccgtacctgctgatcaacaagaagcgttacgcaggcctctatttctctgcc
agtgccgacatgcatgagaagatggactgtaaaggcatcgaaactgtccgaagagacaat
tgccctctggtggctaaccttatcaacacctgtctgcagagaatcctcatagacagggat
ccccagggtgctgtggctcacgctaaagaagtgatctcagacctgctgtgcaaccgcatc
gacatcagtcagctggtcatcaccaaggagctgacgcgcactgcccaggagtacgctggc
aaacaggcacacgtggagctggcagagaggatgagaaaaagagatgctggcagcgcccca
aacctgggagaccgagttccatacgtcatcattaaggctgcaaagggagtagcggcatac
atgaagtcggaggacccgatctttgtgctggagaacaccattcccatcgacacacaatac
tacctggagcagcagctgtccaagcccctgctgagaatatttgagcccatcctgggagag
agcaaggcagaaaacgtcctgctcaagggcgaccacacgcgctgtaagactgtgttgacc
tcgaagatcgggggcctcatggcctttgctcaaaagaggagcacctgtatcggctgcaaa
gctgtgctcaagacagatgcggcagtgtgcaatttctgtaagaagaaggagtctgaactg
taccaaaaagagatctatcacctgaacacactggaggagcgtttctctcgcttgtggact
cagtgtcagcgctgtcagggctccctccatgaggatgtgctctgtaccagtcgggattgt
ccaatcttttacatgaggaagaaggttcaaaaagatttggatgaccagagtaatctggtg
aatcgttttggatggtga
DBGET
integrated database retrieval system
