Cyclopterus lumpus (lumpfish): 117735337
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Entry
117735337 CDS
T09199
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117735337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117735337
Ion channels [BR:
clum04040
]
Ligand-gated channels
Serotonin (5-HT3)
117735337
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
AZUL
RH1
DUF2721
DUF3593
Motif
Other DBs
NCBI-GeneID:
117735337
NCBI-ProteinID:
XP_034395780
Ensembl:
ENSCLMG00005015168
LinkDB
All DBs
Position
8:19156308..19158952
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AA seq
420 aa
AA seq
DB search
MLRSLTQRLWKVFFLLTLLTVGCGHANCTNRRCLAEMLVDKEYLSHPQDENCTHTIWVPL
IEYQTLSVDTKNLRILSFLRASLVWTDPELAWNTSVYKYDQVILPVDTIWTPLLHVTNGL
TSNMYHNSNDLLVSSNGTVYHTVSIKAEVNCEVNMFNYPFASDQCPVAVQAWSKHGCGTD
LSFSELRMVDGAHGDWKTDDVELKKKRQDRNYILVSLSIKASNPFITLLLPSILIILTDV
VSFALPLGGGERNCFKVTLVLSFIMFLIILNNLLPGDGDCSPIIRIHFCVCLVLLVVSML
FSMVATRLYADGRLLFCCLSNSEDTGNEEDGMEDGEVKGDISVIQLSGSEDNSQLLGKVV
NFLEALDAKTLQINRNQMFADKVDKTFFWFYFICGTIYFIAMTYVMVNYECSVDHFDFWN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctcttacccagaggctgtggaaggtgttcttcttactgactttactgaca
gttggatgtggacatgccaactgcacaaatcgccgatgtctggctgaaatgttggtggac
aaagaatatctctctcatccacaagatgagaactgcacccacactatttgggtgccctta
attgagtaccagactctgtcagtcgacacgaagaatctccgcatattaagttttctgcgg
gcctcactcgtgtggaccgatcctgagctggcatggaacacgtccgtttacaagtatgac
caagtgatcctgccagtggatacaatctggaccccactgctccatgtcactaacggatta
acgagcaatatgtaccacaattccaatgatctgctggtaagcagtaacggcacagtgtat
cacactgtgagcataaaggcagaggtcaactgtgaggtcaacatgttcaactatcccttc
gctagtgatcaatgtcccgttgcggtccaagcctggtccaaacatggatgtgggacagat
ttgtcattcagtgaattaaggatggtcgatggggcccatggagactggaaaactgacgat
gtggagctcaagaaaaaaagacaagaccgcaattacatcctggtgtctctgagcattaaa
gcttccaaccccttcataacgttactgctgcccagcatcctgatcatcttgaccgatgtg
gtcagcttcgctctgccgctgggaggcggggaacgcaactgtttcaaggtcacgctcgtg
ctcagcttcatcatgttcctcatcatcctcaacaacctgctccccggagacggcgactgc
agccccatcatccgaatccacttctgcgtctgcctcgtcctcttggtggtgagcatgttg
ttttccatggtggcgacgcgcttgtacgcagacggccgcctccttttctgctgcctgtcc
aactcagaagacacaggaaacgaggaggatgggatggaggacggggaggtcaaaggtgac
atcagtgtcattcagctgagcggctcagaggacaacagtcaattactcggaaaggtggtc
aacttcctggaagctcttgatgccaaaacactgcaaattaatagaaatcagatgtttgcc
gacaaagtggacaagacatttttctggttctacttcatttgtggtacgatatactttatt
gccatgacgtatgtgatggtaaactatgaatgctcagttgaccattttgatttctggaac
taa
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