Cyclopterus lumpus (lumpfish): 117735344
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Entry
117735344 CDS
T09199
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117735344 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117735344 (rangap1a)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117735344 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
SDA1_dom
Nop14
Pes-10
Motif
Other DBs
NCBI-GeneID:
117735344
NCBI-ProteinID:
XP_034395788
Ensembl:
ENSCLMG00005005106
LinkDB
All DBs
Position
8:14580693..14588213
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AA seq
601 aa
AA seq
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MATDIVAQLANSLAKTGVEEVELSYKGQGKKLDDAQSVEEMVKEIQDFEDLQALRLEGNT
VGVEAAKAIAKALETKSKFKRCYWSDMFTGRLRSEIPPALNSLGDALMLAGAKLTVLDLS
DNAFGPDGVKGIERLLKSTACYTLQELRLNNCGMGIGGGKILAASLIQCHKNSSAEGTPL
GLKVFVAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINHPGVTALAKAMQHNAGLRI
LNLNDNTFTEKGAFAMAQALKHLRSIQVINFGDCLVRPAGAIAIAGTVSEGLPILKELNL
SFGEITEEAALTVAQAVKDKDQLEKLDLNGNSLGEDGCKALKDAMEAMNIGELLGSLSDD
EGEPEDDEDDDDDDDHDDDEEEDDEDVDVDEEEIEEEEEEEEEEESNGNKLSTPVAASRP
PDVSSFLSFPSPDKLLKLGAMRAMLIEQQVDVSDATKTAEAFLKIASVYKEDNDDVKNAV
LDSIDALLKKAFSTPSFQGCNFVSTLLVLLGLIKSEDKVKPVLVVRGHLNALEHVASQDY
FPKEYVDVLAVFLSRNPKALESCGNARNSLLSTLQRVRSEDCGHTHTHTHTHTHRDKLNF
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatattgttgcacagttggccaactctctggctaagactggagtagaggaa
gtagagctgagctacaaaggccaggggaaaaagctggatgatgcccagtcagtggaggag
atggttaaggagatccaggactttgaggatttacaggcactgaggttagagggaaacact
gtcggggtggaggcagccaaggccatcgccaaggccctcgagacaaagagcaagtttaag
cgctgttattggagtgacatgttcacaggacgcctgcgctctgagatcccacctgccttg
aactcactgggtgacgctctgatgctggcaggggccaagctgactgttttggaccttagt
gacaacgcctttggaccagatggggtgaagggcattgagaggttgctcaagagcacagcc
tgctacactttgcaggagttgcggctcaacaactgtggcatgggcatcggaggggggaag
atcttggctgcttctttgatccagtgccataaaaactccagtgcagagggaacccccctc
ggcctgaaggtgtttgttgcagggaggaaccgcctagagaacgatggagccactgccctc
gctcaagccttccagttgatgggtagcctggaggaggttcacatgcctcagaatggcatc
aatcaccctggtgtgacagctctggccaaagccatgcagcacaacgcaggcctgcgcatc
ctcaacctcaacgacaacaccttcaccgagaagggggctttcgccatggctcaggccctg
aaacacctccgcagcatccaagtgataaactttggagactgtctggtgcggccagcggga
gccatagctattgcaggaactgtatcagagggactaccaatcctcaaggaactcaatctg
tcatttggcgagatcacggaagaggcagctctgactgtggcacaagcggtaaaggacaag
gaccagctagagaaactggatctaaatggtaacagcctcggagaggatggctgcaaagct
ctgaaagacgctatggaagccatgaacattggcgagcttctcgggtcgctcagtgacgac
gagggtgagccggaagatgatgaagatgatgatgacgatgacgaccacgacgacgacgag
gaagaagacgacgaggatgtggatgtggatgaagaggaaatagaggaggaagaggaagaa
gaggaggaagaggaaagcaatggcaacaagttgtccacccctgtagcagcatcccggccg
ccagatgtatcctccttcctcagctttccgtccccagacaaactgctcaaactgggggcc
atgagagcgatgctgatcgagcagcaggtggatgtttcagatgcgacaaaaacagctgaa
gccttcctcaagattgcatctgtgtacaaggaggataatgatgatgtgaagaatgccgta
ttggacagcattgatgcccttctgaagaaagctttttccactccgtctttccaaggctgc
aactttgtatcaactttgttagtgctgctcggacttatcaagagtgaggacaaggtgaag
cctgtgctcgtggttcgcggccacctcaacgccttggagcacgttgctagccaggactac
tttcccaaagagtacgtggatgtgcttgcggtcttcctgtcccgaaaccccaaggctttg
gagtcatgtggtaatgctagaaacagcctcctgtcaacactgcagagagtcagatctgag
gactgtggacacacacacacacacacacacacacacacacacagagacaaactgaacttt
gactga
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