Cyclopterus lumpus (lumpfish): 117735396
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Entry
117735396 CDS
T09199
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117735396 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117735396 (srebf1)
04131 Membrane trafficking [BR:
clum04131
]
117735396 (srebf1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117735396 (srebf1)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117735396 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117735396 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
117735396
NCBI-ProteinID:
XP_034395865
Ensembl:
ENSCLMG00005020680
LinkDB
All DBs
Position
8:21332946..21346184
Genome browser
AA seq
1218 aa
AA seq
DB search
MNSLSFDDPSLDNLDPTLSLHDPSDIDTALLSDIDDMLQLISHQDMEFGGLFDNPPYTGP
PPSQEDSGLSHSITTPPAPAPAPAAAPAPTTPPPSSSSSILSSSPHLDALLGPPIIRSSS
TPDKAFQPPTFQQSPLAQVPNSTQRQQQAQSLRPPQVEQPQPILSPPAPTQAASPLTLTS
APSPSFNATPQALFTPPAPQTSPQPQLQAQLQAQTQSQQVRINYSNQNSYTTVTPSSLSQ
TTTILSSSPPSVQPVTIHAQLQGVTTTSPLLTTTSPLLTTTSPLLTTTSPLLTTTSPLLT
TSVSPPVQSIAPHMQQVPYLCAPSQVLLQPQYIKAESLLLTTLKHDPCIVTTMATTTPIQ
SASLQAFMGGGTILTTMPVMVDADKLPINRIAISGKPLGQPHKGEKRSAHNAIEKRYRSS
INDKILELKDLVSGSEAKLNKSAVLRKAIDYIRYLQQTNQKLKQENMAFKMAAQKNKSLK
DLVAMEVDGPADVKNELPTPPASDMGSPTSFSHCSSDSEPDSPMGEDTKQPSVDLVDGSA
VEGSAGGMLDRSRMALCTFTFLFLSLNPLAALLCSSGSSSAGSTASAANNHPGRSVLGLD
IAGDSWGWMDWMLPTILVWLLNGILVSGVLIRLLVYGEPVTRPHSGSSVLFWRHRKQADL
DLARGDFAQASQNLWTCLKALGRPLPISQLDLGCAALWSLLRFCLQHLWVGRWLAAKAGG
LRSDRPLKEDASKSSRDAALVYHRLHQLRMTGKLNGSHLSAVHMALSAVNLAECAGSCLP
VASLAEVYVSAALRVKASMPRILHFTSRVFLSSARQACLSSSGSVPPAMQWLCHPLGHRF
FVDGDWAIRSIPKESIYSQAGNTVDPLAQVTQAFREHLLEKALYCVAQPHKEKSPSQGEG
EYADALEYLQLLISASDAAGATSQSFAIGSNMATVIGCDPHSKWWSSVTVVIINWLQGDD
AAAERLYPTVEHLPRSLQNAESLLPKTCLDTFRAVRALLSKPENCQLSLSYSDKASALLR
DSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVWRLQQQGAGPAGSGSVGTSGPVGVHQA
SPLELQGFQQDLSSLRKLAHSFRPAMRRLFLHEATARLMAGASPTRTHQLLDRSLRRRAT
PGAKTEECETRPGQREQAEAVMLACRYLPPSFLSAPGQRVGMLADAARTLEKLGDKRTLH
DCQQMIIKLGSGTTVTNS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctgtcgttcgacgacccgtcgttggataatctggacccgacgctgtcgcta
cacgaccccagcgacattgacacggccctcttaagcgacattgatgacatgctacagctc
atcagccaccaggacatggagtttggaggactgtttgataaccctccgtacacggggcct
cctcccagccaagaggattcgggtttgtcccattccatcaccacacctccagctccagct
ccagctccagctgcagctccagctccaaccacacctccaccttcatcgtcctcttccatc
ctaagcagtagcccacacctggatgcactcctgggccctcccatcatccgtagttcctcc
accccagacaaggcctttcagcctcccacctttcagcagtcccccttggcccaggttccc
aactccacccagaggcagcagcaggctcagagcctcaggccgccccaagtggagcagccc
caacccattctcagcccgcctgccccaacacaggcagcttcacctctaacactaacctca
gcaccaagcccatcttttaacgccacaccccaggccctcttcaccccgcctgcaccccag
acttcgcctcaaccccagctgcaggcacaacttcaggcccagactcagtcgcaacaggtc
cggatcaactacagcaaccagaacagctacacaactgtcactcccagcagtttgagccaa
accaccaccatcttgtcatcctcacccccaagtgttcagccggtgaccatccatgctcag
ctccaaggggtgaccaccacgtctcctctcctgaccaccacgtctcctctcctgaccacc
acgtctcctctcctgaccaccacgtctcctctcctgaccaccacgtctcctctcctgacc
acgtcagtgagtcccccagttcaaagcatcgcaccccacatgcagcaagtaccttacttg
tgtgcaccttctcaggtgttgctgcaaccccagtacatcaaggctgagtctctgttgctg
accactctgaagcatgacccctgcattgtcactaccatggccaccaccaccccaatacag
agcgcttcactgcaggcctttatgggtggtggcaccatcctgacaacgatgcctgtcatg
gtggacgctgataagctgcctatcaaccgcatcgccatcagcggtaagccgctcggccag
ccacacaagggagagaagcgctcagcccacaacgccatcgaaaagcgctaccgctcctct
attaatgacaaaatcctcgagctcaaagatctggtgtctggtagtgaggccaagctcaac
aagtctgcagtgctgaggaaagccattgactacatccgttacctgcagcagaccaaccag
aaactcaaacaggagaacatggcctttaaaatggcagcccagaaaaacaagtctctcaag
gacctggttgccatggaggtggatggaccggctgatgtgaagaacgagctgccgaccccg
ccggcttctgacatgggctcccccacctccttctcacactgtagcagtgactcagagcct
gacagtccaatgggggaggacactaagcagccgagtgtggacctggtagacggatcggca
gtagaaggcagtgccggcggcatgttggaccgctcccgcatggctttgtgcaccttcacc
ttcctctttctctccctaaaccctctggccgctctgctctgctcatccggcagcagctca
gctggaagcacagcatccgctgccaacaaccacccaggaaggagcgtcctgggtttggat
atcgcaggtgactcgtgggggtggatggactggatgctgccaactatactggtgtggctg
ctaaacggtattctggtgtcgggggttctgatccgactgttggtgtatggagagcctgta
accagaccacactctggatcttcggtcttgttctggaggcaccgcaagcaggcggacctg
gacctagctagaggagattttgcccaggccagtcagaacctgtggacctgtctaaaggct
cttggtcgtcccttacccatctctcagctggacctgggctgtgctgcactctggtccctg
ctaagattctgcctccagcacctctgggtgggccgctggctggctgccaaggctggagga
ctgcgctcggaccggcccctgaaggaggatgccagcaaaagcagccgcgacgccgcctta
gtttaccaccgtctgcaccagctacgcatgacaggtaagctgaatggtagccacctgtca
gcagtgcacatggctctcagcgcggtgaacctggccgagtgtgctggttcctgtctgcct
gtagccagtctggctgaggtctacgtctctgcagctttacgggtcaaagccagcatgcca
aggatccttcattttacttctcgtgtgttcctgagcagtgcccgccaggcgtgcctgtct
tccagtggcagtgtgcctccagctatgcagtggctgtgccacccactaggtcaccgcttc
tttgtggatggggattgggctattcgcagcattcctaaagaaagcatctacagccaggct
ggcaacacggtggatcctctggcccaggtgactcaggccttcagggagcatctcctggag
aaggctctgtactgtgtggcccagcctcacaaagagaagagtcccagccagggagagggg
gagtatgccgatgccctggagtacctccagctgctgattagtgcctcggatgcagctggt
gccacctcccagtccttcgctatcggctccaacatggccaccgtgatcggctgtgacccc
cactccaagtggtggtcctcagttactgtggtgatcatcaactggctccaaggagatgac
gccgcggccgagagactgtatccgactgttgagcacctgccccgcagtctgcagaacgca
gagagtcttctgcccaagacgtgtctggacacgttcagggctgtgcgggctctgctgtcc
aagccagaaaactgccagctgagtctgagctacagcgacaaggccagcgccctgcttcga
gacagcctcaacctcggaccacactgtcacagctccagtttagacaaggttgtccagttg
ctcttgtgtgatctcctgttggtgatgaggaccaatgtgtggcgcctgcagcagcagggg
gccggtcctgcggggtctgggtctgtgggtaccagcggcccggtgggagtccaccaggcg
tccccccttgagctccaaggctttcagcaagacctcagttccctacgcaagctggcacat
agcttcaggcctgcgatgcgaagattgttccttcacgaagcgacagcccgcctgatggcg
ggggcgagtcccacccgcacccaccagctcctggatcgctctctgcgacgcagggcgacg
cccggagccaagacagaggagtgcgagacgcgtccgggtcagcgggagcaggcagaggct
gtgatgctggcgtgccgctacctccccccctcctttctgtcggctcccggccagagggtg
ggcatgctggcggacgcagcccgcaccctggagaagctgggagacaagaggaccctccac
gactgccagcaaatgatcatcaagctgggcagcggcaccaccgtcaccaacagctag
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integrated database retrieval system
