Cyclopterus lumpus (lumpfish): 117735437
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Entry
117735437 CDS
T09199
Symbol
rab11fip4a
Name
(RefSeq) rab11 family-interacting protein 4A isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117735437 (rab11fip4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117735437 (rab11fip4a)
Membrane trafficking [BR:
clum04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117735437 (rab11fip4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_9
EF-hand_5
bZIP_2
bZIP_1
Leu_zip
Shugoshin_N
YfbR-like
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
117735437
NCBI-ProteinID:
XP_034395952
Ensembl:
ENSCLMG00005006197
LinkDB
All DBs
Position
8:11329212..11351791
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AA seq
601 aa
AA seq
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MEGHDVPDQEQLLQFLRRLKEVFDVCDEDADGFIRVEHLVDLGLQFGQGDEVKKLTRYLD
PNAHGKVNFKDFCHGVFAIKGCEEILKMAVGPRGVSSSQSVTDNGYIYQNGEAKLGPPII
MYTRSYPDCSVYGEGCSADGECDMDSSAENSNGCDSLDPRRRDGHLIGSASASVISGEEQ
FEDYGEGEDVDFTPSSPCPEEDTRTNGFSDLGSSLPSSAVQTPQKMQQLYNSELLDIYCS
QCCKKVNLLNDLEARLRNLKANSPNRKITSTAFGRQLFQANHSVFGSSQGSSTEDLFTDS
IDSCDLDITEKVSYLEKKVTELESDSLANGDLKSKLKHENTQLVHRVHELEEQVKDAEAR
ADQSLEEETKRHREAFSKMDRDRNGEIDLLCNRVQLLEEENGEMKLNVCRLKSQTEKLDQ
EKQRMTDKLEDTGLRLKDEMDLYRKIMDKLWQNRHEFQKEKEAMQELIDDLRRELEYLQL
FKLELEHPGEGRGLSEFNVRTREIEMEHEVKRLKQENHKLRDQNDDLNAQILSLSLYEAK
NLFACHTKAQCLAAEIDNASRDELVDALKHQEEINLRLRQYMDKIILAILDHNPSILEIK
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacacgacgttcccgaccaagagcaactcttgcagtttctgaggaggctcaag
gaggttttcgacgtgtgcgacgaggatgctgacggcttcatccgggtggagcacttggtg
gacctcggtcttcagttcggtcaaggagacgaggtgaagaagttaaccaggtacctggat
cctaacgctcatgggaaggtcaacttcaaagacttttgccacggagtgttcgccattaaa
ggttgtgaggagatcctgaagatggctgtgggtcctcgcggtgtttcctccagccagtct
gtgactgacaatggttacatttaccagaacggtgaggccaagctgggcccccccattatc
atgtacacgcgctcctacccagactgcagcgtgtacggcgagggctgcagcgccgacggg
gagtgcgacatggacagcagtgccgaaaacagcaatggctgcgactctttggatccgagg
cggcgagacggccacctgattggctcggcgtctgcgtctgtcatctccggggaggagcag
tttgaggactatggggagggggaggatgtggattttactcccagcagtccttgccctgaa
gaggacacccgaacgaatggcttctcagacctgggatcctcccttccctccagtgctgtg
cagactcctcagaagatgcagcagctgtataacagcgagctgctggacatctactgctct
cagtgctgcaagaaagtgaacctgctcaacgacctggaggctcgacttcgaaacctcaag
gccaacagcccgaacagaaagattactagcacagcatttggacgtcagctgttccaggcc
aaccacagtgtgtttgggtccagccagggaagcagcacagaggatctgttcacggacagc
atcgactcctgcgacctcgacatcacagagaaagtcagttatctggagaagaaggtgacg
gagctggagagcgacagtctggccaacggtgacctcaaatctaaactcaagcacgagaac
acacaacttgtgcacagggtgcacgagctggaggagcaggtgaaggacgcagaggcgagg
gcggatcagagtctggaggaggagaccaagaggcaccgggaggctttcagcaagatggac
cgggacaggaatggggagatagatctgctctgtaacagggtacagctgttagaagaggag
aatggagagatgaagttgaacgtgtgcagactcaagtcgcagactgagaaactggaccag
gagaagcagaggatgacggacaagctcgaggacactggcctgaggctgaaagatgagatg
gacctctaccggaagataatggacaagctctggcaaaaccgccatgagtttcagaaggaa
aaggaggccatgcaggagttgatcgatgacctccgccgggagctggagtatttgcagttg
tttaagctggagctggagcatccaggagagggcagggggctctctgagttcaacgtcagg
accagagagatcgaaatggagcacgaagtcaagagactgaaacaggagaaccacaagctg
cgggatcagaacgacgacctgaacgctcaaattctcagtctgagtttgtacgaggccaag
aacctgtttgcctgtcacaccaaggcccagtgcctggcagccgagatcgacaacgcgtcc
agggacgagctggtcgacgctttgaagcatcaggaggagatcaacctgcgtctgaggcag
tacatggacaaaatcattctggccattctcgaccacaacccctccatcctggagatcaag
agttaa
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