Cyclopterus lumpus (lumpfish): 117735445
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Entry
117735445 CDS
T09199
Symbol
cacnb1
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117735445 (cacnb1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117735445 (cacnb1)
04261 Adrenergic signaling in cardiomyocytes
117735445 (cacnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117735445 (cacnb1)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117735445 (cacnb1)
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
117735445
NCBI-ProteinID:
XP_034395967
Ensembl:
ENSCLMG00005010927
LinkDB
All DBs
Position
8:16565826..16593383
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AA seq
632 aa
AA seq
DB search
MVQKSSMSRTPSTSTQEIQMDMFDHHPHTQGKYGKRKSRFKRSDGSTSSDTTSNSFVRQG
SADSYTSRPSDSDVSLEEDPEALRKEADRQALATLEKAKTKPVAFAVRTNVGYNPGPSDD
VPVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENTRLLQEQKMRQ
NRLSSSKSGGSSSLDVATGTRRPTPPGTGGPAKQKQKSMEHVPPYDVVPSMRPIILVGPS
LKGYEVTDMMQKALFDFLKHKFEGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSS
LAEVQSEIERIFELARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRLIKS
RGKSQAKHLNVQMVAADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPPSSN
PPNPLLNRTMATAALAASPEPVSNLQGPYLVHGEQKREGPLTECGGSGTLHDYQTDMGGK
PQQQQQQQQQQQAYLRSSRGQLRGGSGRGLSRQDTFDSETQGSRDSAYTEAGDSCMDIET
DPYEEPEPYRGGGGSRLHLAQHHGRQASWEDEGAEPDQENLNHPSMPSQTQPHGRAKLRE
RYCQDPADPVDTEANMSRNKNQDDWGRDVYIR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaaaagtagtatgtccaggacgccttcgacctcaacccaggagatccaaatg
gacatgttcgaccatcatccacacacacaggggaagtacggcaagaggaagagccgattc
aagcgctcggatggaagcacctcctctgacaccacctcaaacagctttgtccgacagggc
tctgcggactcctacaccagccgaccatcagactcagacgtgtccctggaggaggaccct
gaggctctgagaaaagaggccgacagacaggccctcgccacgcttgagaaagcaaagacc
aaaccggttgcttttgctgtccggacaaatgttggttacaaccccggtcccagtgatgac
gttcctgtgcagggcatggccatatccttcgaagccaaagacttcttgcacattaaagag
aaatacaacaatgactggtggatcggacgtctggtgaaggagggctgtgaggtgggcttc
attcccagcccggtcaagctggagaacacccgtctgctgcaggagcagaagatgagacaa
aaccgactcagctccagtaaatctggaggaagctccagtctggacgtggccacgggaacc
cgcaggcccaccccacctggcacaggtggcccagccaaacagaaacagaagtcgatggag
catgttcccccctatgatgtggttccctccatgagacctatcatcctcgtcgggccgtca
cttaaaggatatgaggtgacagacatgatgcagaaagcactctttgactttctgaaacac
aagtttgagggcaggatatccatcacacgagtgacagcggacatctccctggccaaacgg
tcagtcctcaacaaccccagcaaacacaccatcattgagcgctcgagtacccgctccagc
ctggcggaggtgcagagtgagattgagcgtatctttgagctggcgcgcactctccagctg
gtcgctctggatgcagacaccatcaaccacccctctcagctggctaagacctccctggct
cccatcattgtctatatcaaaatagcctcacctaaggtcctccagaggctcatcaaatcg
agggggaagtctcaggctaaacacctcaatgtgcagatggtggcagcagacaagttggcc
cagtgcccacctgaattgtttgacatcatcctggatgagaaccagctggaggacgcctgc
gaacacctggctgactacctggaggcgtactggaaggcgacacaccccccgagcagcaat
cctcccaaccctctgctcaaccgtacaatggccacggcagcactggccgcctcccctgag
cccgtctccaacctgcaggggccgtacctggtgcacggggagcagaagcgtgaagggcct
ctgacagagtgcggcgggagcggcaccttgcatgactatcagacagacatgggaggaaaa
cctcagcagcagcagcagcagcagcagcagcagcaagcctacctgcgctcctctcgtggc
cagctgaggggaggaagcggccgggggctgtcgaggcaagacacctttgactctgagacc
cagggcagccgggactctgcgtacaccgaggctggcgactcctgcatggacattgagacc
gacccctacgaagagcccgagccataccgaggcggtgggggcagccgcctccacctggcg
cagcatcacggcagacaggcatcctgggaagacgaaggcgccgagccggaccaggagaac
ctcaaccacccttcgatgccgagccagacgcagccgcatggacgcgccaaactgagggag
cgttactgccaggaccccgcggaccccgtggacaccgaggccaacatgagccgcaacaag
aaccaggacgactgggggagggacgtctacatccgctga
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