Cyclopterus lumpus (lumpfish): 117735454
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Entry
117735454 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117735454
03037 Cilium and associated proteins [BR:
clum03037
]
117735454
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117735454
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117735454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117735454
NCBI-ProteinID:
XP_034395981
LinkDB
All DBs
Position
8:19482357..19493472
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AA seq
776 aa
AA seq
DB search
MVKIELRVCSTEILSRTMADGVNVCQIDSDSESDFENMGESEPGGHSFQLFGEPATSTQR
CPEPLQIGVFRARLPFPASGPIRGERLDGEQMNSLQRHRWSAATLKVLSAMPSRTAGMNS
AAVPPRQVRGSSRPQTSSSREADVEEIENKKRLVLNLRXLSVSEGTRKLRATPLSLADKM
AVRRLAFRNVAERSLLGRNARYSRLSACVSRAWRRCLLGGLPVLASLQLWHSPMKRLSGR
FGSGVLSYFLFIRILLLFNLLLFVIFGLFLVFPQAVNPPPPLPPGSDLDNFTGLELLAGT
GYISHSVMFYGYYTNTVLQTPQTVPYSIPAAYLLTVAVSFFVISIILVYSTSKSFGGSFQ
VLKSHGNLAVQVFCCWDFKVTKKLSVKLQSEKISTQLKELLSEVIGGEDEKSCTQRLCRL
VVHLMAWATCLASICLGAMAVHYLSEAAIKQSPFREAELLLLSAVVSGVNLLLPGLFNLC
AWMESHDSPSVRVYVSIFRNLLLKVSVVGVLCFRWLGRIAVEPEKCGLQCWESFXGQELY
RLLLMDFVFTVLYTFLGEFLWRQALFXEILKRKRMPVFDIARNVLEIIYGQTLTWLGVLF
APLLPAVQIIKLFLLFYMKTSSLMLNCQASRKPWRASQMTTLFISLLCFPSFLGAAVSVT
YIIWKIKPSSKCGPFRNLTTMFQSGQLWARELEAAHPILSPLSWAYNAVLENPLFLFLAA
GVFLLVLYFHTQVVDGQRRIISRLKTQIENEGKDKKFLIANLQAVYERSGLVSPRR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagattgagctgcgtgtttgcagcacggagatcctctcaaggaccatggcagac
ggtgtcaacgtttgtcaaatagattctgattccgagtctgactttgagaacatgggagaa
agtgaaccgggtgggcactccttccagctctttggagagccagccaccagcacccagagg
tgtcctgaacccctacagataggtgtttttagggcacgtctgccatttcctgccagtggg
cccattcgaggcgagaggctcgacggggagcagatgaactctctgcagaggcatcgctgg
tctgccgccaccttaaaggtcctctccgcaatgcccagtcgcactgctgggatgaatagc
gcggcggtgcctccacggcaggtcagagggtcatctcggccccagacctcctcctcccgt
gaggcagatgtggaggaaatcgaaaacaagaagcggctggtgctcaacctccggngcctc
tcggtgagcgagggcacgcgcaagctgagggccacgccgctcagcctggccgataagatg
gccgtcaggcgacttgctttcagaaacgtagcggagcgttcactcctcggcagaaatgcg
cgctacagtcgcctgagcgcgtgcgtatctagggcatggcgtcgttgcctgctcggcggc
ctccccgtcctcgcgtccctccagttgtggcattcacccatgaagagactgagcgggcgt
ttcggaagcggcgtgctttcctacttcctgttcatccgcatcctcctgctctttaacctc
ctcctcttcgtcatcttcggcctgttcctggtcttccctcaagccgtcaaccctcctcct
cctcttcctcccggctctgatctcgacaatttcaccggcctcgagcttctcgcaggcacg
ggttacatctcccatagtgtgatgttttacggctactataccaacaccgtcctccaaacg
ccccagacggtgccgtacagcatacctgcagcctatctcctcaccgtcgccgtctccttc
ttcgtcatcagcatcatcctcgtgtacagcacgtccaagtccttcgggggaagttttcaa
gtcctcaagtctcacggaaacctggctgtacaagtgttctgctgctgggactttaaagtc
accaagaagctgtctgtcaaactgcagtctgagaaaatcagcactcaactcaaagagctg
ctgtccgaggtgatcggtggagaagatgaaaagagctgcacgcagcgcctctgccgcctc
gtggtgcacctgatggcgtgggcgacatgtctggccagcatctgtctgggtgccatggca
gtccactatctatcagaggctgccatcaagcagagtcctttcagagaagctgagctgctg
ctcttgtctgctgtggtgtccggcgttaacctcttactgcccggcctcttcaacctgtgt
gcctggatggagagtcacgactcgcccagtgttcgtgtctatgtctccatcttcagaaac
ctattgttgaaggtcagtgttgttggagtgctgtgtttccgctggctggggagaattgct
gtggaaccagaaaagtgtggcttacagtgttgggagagctttngtgggcaagaactgtat
cgcttgctcctgatggactttgtcttcacggtgctttacacttttttgggagagttcctg
tggaggcaagctcttttctgagaaattctgaaaaggaagaggatgccagtgtttgacatc
gctcgcaatgtgctggaaatcatatatgggcaaaccctaacttggctcggggtgctgttt
gcgccactgcttcctgcggtccagatcattaaactgtttttgttgttttacatgaagacg
agcagtctaatgcttaactgtcaggcatccagaaagccctggagggccagtcagatgacc
acactattcatctctcttttgtgcttcccctcgtttcttggcgctgccgtgtctgtcact
tacatcatttggaagattaaaccctcgtcaaagtgcggccctttcaggaatctcaccacc
atgtttcagtcggggcagctgtgggcccgggagctggaggccgcccaccccatcttgtct
ccgctcagctgggcctacaacgctgtgctggagaacccactgttcttgttcctcgccgct
ggagtctttctattagtgctatattttcacactcaagttgttgatggccaaaggaggatc
atcagtcggttaaaaacgcaaattgaaaatgagggtaaagacaaaaagttcctcatcgcc
aatttgcaagccgtttatgaacggagtggtctggtttcccctcgtagataa
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