Cyclopterus lumpus (lumpfish): 117735465
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Entry
117735465 CDS
T09199
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117735465 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117735465 (nup85)
03036 Chromosome and associated proteins [BR:
clum03036
]
117735465 (nup85)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117735465 (nup85)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117735465 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117735465
NCBI-ProteinID:
XP_034395994
Ensembl:
ENSCLMG00005000758
LinkDB
All DBs
Position
8:complement(21787790..21795130)
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AA seq
653 aa
AA seq
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MMEEVDVEPAVTNIPAASDGKHLGFAWGPGDILVYETLYKASVAQGSGCSFIHEVRKDED
IYSPNLRKLFNESHHIFVGLQTIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TKDAEVATQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKAA
EVLQSESPAEHHDYWDVVVSYVLQGRLEEARQMLVKQATLHPAARKMYKLMDTLLSKMPF
YNPGGTQTLTEFDVKWRHWHGEVNRCLQDNSFASNQHLEIICKIIVGDEDTLLEHKELLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSCMTMFLDARSVPEPLDNILLAAFEFDIHQVIK
ECSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDNCPEFGRVYLGLQIEHIPLDTERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCTRGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHKLYGEKRFSEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHELMF
CLEELTSSLNHSAPGTDKPTQDEDIEQTKVELLRLALARNLAMAIIKEGTIEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggtagacgtggagccggcagtcacaaatattcctgcagcaagtgatggg
aagcatttgggatttgcatggggtccaggtgatatccttgtgtatgagaccctctacaaa
gcatcagttgctcaaggatcaggctgctccttcatccatgaagtcaggaaagatgaggat
atatattcgcccaatttacgcaaactcttcaatgagtcacatcacatctttgttggcctt
cagacgattagagaggatctcccaagcaagaacaaaaaaccccaatttgtcagcatcagt
aaaaactacagatctgtgatacgagcctgtatggaggagcttcagcaagttgcagtttct
acaaaagatgcagaagtagccacgcaatatggaaatcaggtgtccattctgttggccata
gaactgatctggaatctgtgtgaagtgctgttcattgatgctgctcctgcgggttccctg
ttgctccacctcctcgactgggtaaggttacacaaggctgatgtggacgagaaggccgca
gaagtgctgcaaagtgagagccctgctgagcaccacgactactgggatgtggtggtgagt
tatgtcctgcagggcaggttggaagaagccagacagatgctagtgaagcaggccaccctg
caccctgctgccaggaaaatgtacaagctgatggacactttgctcagcaagatgccattc
tacaatccgggtggcacccagacgctgacagagtttgatgtgaagtggagacattggcat
ggcgaggtgaaccgctgcctgcaggacaactcgtttgccagcaatcaacacctggagatc
atctgcaagatcatagtgggggatgaagacacgctgctggagcacaaggagctactgagc
acctggtaccacttcctggtcactaggctgctcttcagccaccccacagtcaaacccact
gagttacattactatgcacagtcatgtatgacgatgtttttagacgcgaggagcgtccca
gagcccctcgacaacatcttactggctgcctttgagtttgacatccatcaggtcatcaag
gaatgcagcattgctctcaacaactggtggtttgtggcccatttgacagatctgttggat
cattgcaagctccttcagtctcacaatctacactttggctccaacttgagggagtttctc
ctgttagaatatgcttctggtctcttcactcatcacagcctgtggcagttggccgtggac
tactttgacaactgcccagagtttggccgcgtctacctggggctgcagattgagcatatt
cctttagacacggagcgcaaagccctcaaggtgctcaggatctgtgagcagaggcaaatg
tcagagcaagtgcggagtatctgtaaaatcatggctatgcgagccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagggccaaagatgctgcctttgccacactcatt
tcagagaggtttctacaggattactgcaccagagggaccttctctgatttggacctgata
gacaacttgggtccagcaatgctgctcagtgacaggctcactttccttggaaagtatcgt
gagttccacaagctgtacggagagaagcgcttcagcgaggcggccaagctgctcctctcc
ctcatgacggccaagatcgcccctcggagcttctggatgactctgctgacagacgcgctg
ccgctgctggagcagaaagaggtgatcttctcagcagaccaaacccatgagctgatgttc
tgtttagaggagctcacctcctcactgaaccactcggctcccggcacagacaagcccacg
caggatgaagacatcgagcagaccaaagtggagctactgagactcgccctggccaggaat
ctggccatggctattatcaaagagggaactattgaagcatga
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