Cyclopterus lumpus (lumpfish): 117735501
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Entry
117735501 CDS
T09199
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117735501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117735501
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117735501
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117735501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
SinI
T2SSM
Motif
Other DBs
NCBI-GeneID:
117735501
NCBI-ProteinID:
XP_034396050
Ensembl:
ENSCLMG00005013111
UniProt:
A0A8C2ZG68
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Position
8:complement(7809221..7812880)
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AA seq
339 aa
AA seq
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MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPEKPYKGSGFRCIHV
GEKVDPVVEKAAKESGLDIEDVRNNLPQDLSVWIDPYEVSYQIGEKGPVKVLYVDDGNES
GASSGGLDLDKEIKNSFNPDAQVFMPINEPVNAASPGSTSPSPPFGHSAAVSPTFMPRST
QPLTFTTATFAATKFGSTKMKSSGRNNNGSSSAGNKVARTSPTNLGLNVNSLLKQKAIST
SMHSLYGLGLGVQQQQQKPSALSPNAKEFVFPSLQGQGSQSALFPGDSSLSLSPLQYSNA
FDMFAAYGGLNDKSLMDGLNFSLNNMQYSNQQFQPVMAN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagctctcaacttcatcatctcgtacctgtataacaagctg
ccaaggcggcgcgttaacattttcggcgaggagctggagaggcagctgaagcagaaatat
gagggtcactggtacccagaaaagccatataagggctcaggattcagatgtatccatgtg
ggggagaaggtggaccccgtggtggagaaggcagccaaagagagcgggctggacattgaa
gatgtccgcaacaatctgccacaggacctcagcgtgtggattgacccctatgaggtgtcc
tatcagattggagagaagggcccagtcaaagtattgtatgtcgatgacggcaatgaaagt
ggagcaagtagtggggggcttgatctggacaaggagatcaagaacagtttcaatcccgat
gcacaggtcttcatgcccatcaatgagcctgtgaacgcagcctctccgggttccacctca
ccctctcctccatttgggcactcggcagcagtcagccccacctttatgccccgctccacg
cagcctttaaccttcacaactgccaccttcgccgccaccaagttcggctccactaagatg
aagagcagcggccgcaacaacaatggcagcagtagtgctgggaacaaggtggcacgtacc
tctcctaccaacctgggcctgaatgtgaacagtctcctgaaacagaaagccatctccacc
tccatgcactctctttacgggttgggccttggggtgcagcagcagcagcagaagccctca
gccctgtcccctaatgccaaggaatttgtgttccccagcctgcagggccagggcagccag
agtgctctcttccctggagacagctcgctcagcctcagcccgctgcagtacagcaatgcc
tttgacatgtttgcggcctacggtggccttaacgacaagtcccttatggatggcttgaat
ttcagcttgaacaacatgcagtattctaaccagcaattccagccagttatggccaactag
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