Cyclopterus lumpus (lumpfish): 117735556
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Entry
117735556 CDS
T09199
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117735556 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117735556 (gtf2f1)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117735556 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117735556
NCBI-ProteinID:
XP_034396129
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All DBs
Position
8:complement(7407259..7413243)
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AA seq
534 aa
AA seq
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MTSLGSSSSSATEYTVRVPKNTSKKYNLMAFNAGDKVNCSTWTQARMERDMSGRRIYGDE
ETADGAAGSEFGKKQREEARRKKFGIVKREFKVEDQPWILKVNGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGGDDDDDENEKSGKKKKKGGGRGGDLRIHDLEEDLEMSSDDSDSSLGDDGESK
TKSKKDTGKGKAKKKKKRKSSDKEALEDSDDGDYEGLEVDYMSDESSSSDEEPEKGKISK
GEDHPKGIDEASESEEESEEEKPNEEEAKEEEEEEEGKKTPVQTEKKKKKDSSGESESSD
DSDIDGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQ
GKRPTPGPSADSPAAKRLKMEPSSQSPAPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYL
IRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacttccctggggagcagcagttcctcagccacagaatacacagtgcgagtccccaaa
aacaccagcaagaagtacaacctcatggctttcaatgcaggagacaaagtcaactgttca
acctggacacaggctcgtatggaaagagacatgagtggccggcggatatatggggacgaa
gagacggcagatggcgcagctggcagtgagtttggcaaaaagcagcgcgaggaagcgcgg
cggaagaagtttggtatcgtcaaacgagagttcaaagtggaggatcagccctggattctc
aaggtcaatggcaaggctggcaagaggttcaaaggtctaaagaaaggcggtgttacagaa
aatgcatcctactacatctttacccagtgtcctgatggagcttttgaggccttccctgtc
cacggctggtacaactttacaccgcaggccaagcaccgaaccctgactgctgaggaggct
gaggaggagtggggcagaagaaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgtttccgggagcaggagcgtggtggtgacgatgatgacgatgagaatgagaagtcggga
aagaagaaaaagaaggggggtggcagagggggcgatctgcgcattcacgacctggaggag
gacttggagatgagcagcgatgacagtgacagcagtctgggggacgatggagagagtaag
acaaagtcgaagaaagacacggggaaaggaaaagcaaagaagaagaagaagagaaagagc
agcgacaaagaggccttggaggacagcgatgacggtgactacgagggtctagaggtggat
tacatgtccgatgaaagcagcagttcagacgaggagccagaaaagggaaagatcagcaaa
ggagaggatcatcccaaagggatcgatgaggcgtccgaaagtgaggaagagagtgaggag
gagaaaccaaacgaagaggaagcgaaagaggaggaagaagaagaggaaggaaagaaaacg
ccggtccaaacagaaaagaagaagaaaaaagacagcagcggagagtcagaaagctcagac
gacagtgacatcgatggagagactgcctctgctctgttcatgaagaagcgcacgcctcct
aaacgtggaggacgtggctctgcaggcagctccaggactggcagtcgccccggtacccca
tccatcgactctgcctccacctccaacacgctccgagctgctgccagcaagctagagcaa
ggtaagagaccgactccgggtcccagcgctgactctccagctgcaaaaaggctaaaaatg
gagcccagcagtcagagccctgctccctctgggaagagtacgcctcagccaccatcaggc
aaatccactcctagctccagtgatgtgcagctaacagaggaagcagtccggcgatacctg
atccgtaaaccgatgacaaccaaagacctgctgaagaagttccagacaaagcggacaggt
ttgagcagtgagcagactgtcaacgtgctggcacagatcctgaagcgcctcaatccggag
cgcaagaatgtgaacgacaaaatgcacttctacctcactgaataa
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