Cyclopterus lumpus (lumpfish): 117735602
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Entry
117735602 CDS
T09199
Symbol
si:ch73-281f12.4
Name
(RefSeq) RA_Radil_like and Myo5p-like_CBD_Rasip1 domain-containing protein isoform X1
KO
K26418
Ras-associating and dilute domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117735602 (si:ch73-281f12.4)
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Gene cluster
GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_6
PDZ_2
FHA
Motif
Other DBs
NCBI-GeneID:
117735602
NCBI-ProteinID:
XP_034396201
Ensembl:
ENSCLMG00005006586
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All DBs
Position
8:complement(2788444..2814454)
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AA seq
1141 aa
AA seq
DB search
MISEERSGHVNKQALNFPVALIIRSPKKRLVKLGRKPSDGSVQSNNSDITVRSTESAGVR
QPAKSKIRRHNNRLSAVFNHSPGSGRRSQTLGSGTPVGDLQAADDPAELSSQMSVPGILK
IFGSDICQGTHYKSVLATTQSSAKELVKEALERYCLEKEDANDYVLCDVIGQTGEDNQWK
RECFRVVGDNEKPLMLQSLWKPKEGFSRRFEIQLRASVEEQSLKDRDTVTAGINAQARKL
QKSRSRVASLFVDGSGEDADGLGIWRSLSEMDLPAMGKEASRARQSAGLTEDPEAEADKE
VLRLGMEKEETESSDDNTTQYSIHPPFDFPYFLLLQGYSHRQDFVIYLMSGTTTVFGCCR
EHCNGEDEERLKVDILLFAPDVLPQHCCVRRLDSNPSTSAGELRKTLTMLKPLHGAPVTR
NGSLLKEEVELNTGDLVGLGKHYLFMFKDPTGASGSPQTPPWMSALCPNSDAKTSSSCSS
CGSSIGDKKRLRGRPPPRWKDPEGAEALVSYEPEQEERVLREVLDTLDPGGNEPKLTPAF
LLILCIQRSASAFELTHFRQLLLRIAAQIQLVMWEKTKELAAIQTEASSSDRPPECLQLL
SMEELIPGLRPLVLWMANSIELLHFIQHEVPQLLPWRQDQEDTGPLDSEMSSTRTACEEA
MTVLEEVIMFTFQQSVYYLTKSMYSALSGLLDWNPFSESGQLRAPDGLGGILEVLKETLT
LLTAFQVHPDISLQLCAYLLFFINASLFNALMERGSVAGFYQWSRGVQIRANLDLLLDWI
QSIGLGDLANEYLQKLSVAVNLLATPRETLLQASWASLRAEYAALNAAQLHHMLREYSSG
KPCPAGWTPARVDAEDAVRTADVLESFDSHPPLILPESSFHLELAKPVAEPALFRQLARL
QEFIRRLPRGETRAEPGAEEQTLDGTTADGQSATRALQDPAHRVGPDPDQTYPAEPPQAR
GSHGVLSSYEAVLTQKLRNLELHNTLPGHGDMGYHKSLALDPSCLLTPPNTPQGMELAEL
EADLREGARQQKKASGCADEGREEVFTVELHRGPRGLGLALVDGTKTQLRMSGIYVKSVV
PDSPAAQCQKLRTGDRILAVNGVSVVGTEYNFGRELIRSSGDSLRLLVAKMDPKGSSTTE
C
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggaggagagaagcggccacgtaaataaacaagccctgaactttccggtggct
ttaatcatccgctctccgaagaagcgactggtcaaactgggaaggaaacccagcgatgga
tctgtccagtccaataactcggacatcaccgtccgctccacagagagcgccggcgtccgg
cagccggccaagagcaaaatccgccgccacaacaaccggctctcagccgttttcaaccac
agccccggcagcgggcgccgcagccagacgctgggcagcgggacccccgtcggtgacctc
caggccgcggacgacccggcggagctgtccagtcaaatgtcggtccccggcatcctgaag
atcttcggcagcgacatctgtcaggggacccactataagagcgtgctggccaccactcag
tccagtgcaaaggaactggtgaaggaggccttggagaggtactgcctggaaaaagaagac
gccaacgactatgtgctgtgcgatgtgattggccagacgggtgaggacaaccagtggaag
agggagtgcttccgggtggtgggagacaacgagaagcccctcatgttgcagtcgctatgg
aaacccaaggaaggcttctccaggcgcttcgaaatccagctgagagcgagcgtcgaggag
cagagtctaaaggaccgggacaccgtcacagcaggcatcaacgctcaggcccgtaagctg
cagaagagccgctccagagtggcctcgctgttcgtggacggcagcggcgaggacgcggac
ggactcggcatctggaggagtctgagcgagatggacctgcccgcgatggggaaggaggcc
agccgggcccggcagagcgccggcctcacagaggatccggaggccgaggccgacaaggag
gtgctgcgtctcggcatggagaaggaggagacggagagcagcgacgacaacaccacccag
tactccatccacccgcccttcgacttcccgtacttcctgctgctgcagggctacagccac
agacaggattttgtcatctacctgatgagtggaaccaccactgtcttcggctgctgcagg
gagcactgcaacggagaagatgaggagaggttaaaggtcgacatccttctctttgccccc
gacgtgttgcctcagcactgctgcgtcagacgcctggactccaacccctcgacctccgcg
ggcgagctcaggaagacattgacgatgctgaagcccctccacggggccccggtgacccga
aacggttccctcctcaaagaggaggtggaactgaacacgggggacttggtcggcttgggg
aaacactacctgttcatgtttaaggatccgaccggcgcatccgggtccccgcagacccct
ccgtggatgagcgcgctctgccccaactcggacgcgaagacgtcctcctcgtgttcatcg
tgcggctcctccatcggcgacaaaaaaaggctccgcgggaggccgccgcctcgttggaag
gaccccgaaggcgcggaggctctggtgagctacgagccggagcaggaggagcgggtcctg
cgggaggttttggatacgttggaccccggtgggaacgaacccaagctgacgcccgccttc
ctgctgatcctctgcatccagcgctcggcctccgcgttcgagctgacgcacttcaggcag
ctgctgctccggatcgccgcgcagatccagctcgtcatgtgggagaagacaaaggaactc
gcagcgatccagacagaagcgagctccagtgacaggccgcccgagtgtcttcagctgctc
agcatggaggagctgatcccaggtctgcggcctctggtcctgtggatggccaactccatt
gaactgctgcacttcatccagcacgaagtccctcagctgctgccctggaggcaggaccag
gaggacacaggcccgttggactctgagatgtcctccactcgtacggcctgcgaggaagcc
atgacggtcctggaagaagtcatcatgttcaccttccagcagtccgtctactacctaacg
aagagtatgtactcggccttgtccggtctgctggactggaacccgttctcggagagcggt
cagctgcgagcgcccgacggactcggcggcatcctggaggttctgaaggagacgctgacg
ctcctcacggccttccaggtgcacccggacatctcgttacagctctgcgcctacctgctc
ttcttcatcaacgcgtcgctcttcaacgccctcatggagagagggtccgtcgctgggttc
taccagtggtcccgaggagttcagatccgggccaacctggacctgctgttggactggatc
cagagcatcggtcttggcgacctggccaacgaatacctccagaagctctccgtcgccgtc
aacctgctggccacacccagagaaacgctcctgcaggcgtcctgggcttccctcagggcc
gagtacgccgccctgaacgccgctcagctccaccacatgctgagggagtacagctctggt
aaaccctgtcccgccgggtggaccccggcccgggtcgacgccgaggacgcggtccggacg
gccgacgtcctggagagcttcgacagccacccgccgctcatcctgcccgagagcagcttc
cacctggagctggcgaaacccgtggcggagcccgctctgttccgacagctcgcccgcctg
caggagttcatacgccgactgccccgcggtgaaacccgagccgagcccggcgcggaggaa
cagaccctcgacgggacgaccgcagacggccagtctgcgaccagagccctccaggacccc
gcccatcgggtgggccccgacccggaccagacctaccccgcagagccgcctcaggccaga
ggatctcatggcgtcctgagcagctacgaagcggtcctgacccagaagctgaggaacctg
gagctgcacaacaccctcccgggacacggcgacatgggctaccacaagagccttgcgctg
gacccgtcctgcctgctgacgccccccaacaccccgcagggcatggagctggctgagctg
gaggccgatctgcgggagggcgcccggcagcaaaagaaagccagtggatgtgctgacgaa
ggcagagaggaagtgttcacggtggagcttcacagaggacctcgcgggctcggcctggcg
ctcgtggacgggacgaaaactcagctgagaatgagcggcatctacgtgaagtcggtggtt
cccgactctcctgccgctcagtgtcagaagctgaggacgggcgatcgcatcctggctgtg
aacggcgtcagcgtggtcggaacggagtacaactttggcagggaactgatccgatcgtca
ggagactctctccgactgctggtggccaaaatggacccgaagggctcgtctacgactgaa
tgctga
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