Cyclopterus lumpus (lumpfish): 117735678
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Entry
117735678 CDS
T09199
Symbol
abat
Name
(RefSeq) 4-aminobutyrate aminotransferase, mitochondrial
KO
K13524
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:
2.6.1.19
2.6.1.22
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00250
Alanine, aspartate and glutamate metabolism
clum00280
Valine, leucine and isoleucine degradation
clum00410
beta-Alanine metabolism
clum00640
Propanoate metabolism
clum00650
Butanoate metabolism
clum01100
Metabolic pathways
Module
clum_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
117735678 (abat)
00650 Butanoate metabolism
117735678 (abat)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
117735678 (abat)
00280 Valine, leucine and isoleucine degradation
117735678 (abat)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
117735678 (abat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117735678 (abat)
Enzymes [BR:
clum01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
117735678 (abat)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
117735678 (abat)
Amino acid related enzymes [BR:
clum01007
]
Aminotransferase (transaminase)
Class III
117735678 (abat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
117735678
NCBI-ProteinID:
XP_034396372
Ensembl:
ENSCLMG00005006119
LinkDB
All DBs
Position
8:complement(8497789..8525945)
Genome browser
AA seq
500 aa
AA seq
DB search
MASSLISRQFALSLQKNLWLSAPGCRYVSKAAPKTQVEFDYDGPSMKTSVPGTRSQELTK
QLGDIQNVGAINFFCNYDESRGNYLVDVDGNRMLDIYTQISSIPIGYNHPALLKLMSNPN
NLSTLVNRPALGILPPENFPNKLTESLLSVAPSGMGRVQTMACGSCSNENAYKAMFIWYR
NKERGHNIPSDEDLSSCMVNQVPGCPELSILSFMGAFHGRTMGCLATTHSKAIHKLDVPS
FDWPIAPFPKLQYPLEEFSRENAQEEARCLEEVEDLIVKWRQKGKPVAGIVIEPIQAEGG
DNHASPDFFRSLRNIACKHGCAFHVDEVQTGGGNTGKFWAHEHWGMDDPADIVSFSKKLL
TGGYYHKDELQADKPYRIFNTWMGDPSKNLLLAEVLNVIRKENLLEEVTRSGKALINGLY
ELQAQYPGILSRARGQGTFCAIDICDDATRSSILLKARDKGVLLGGCGDRSIRFRPALVF
KDYHVHIFLNIFNEVLAQHK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccttgatcagccgtcagtttgctctctccctgcagaaaaatctgtggctc
agtgctccaggttgtcgatatgtcagtaaggccgcaccaaagacccaggtggagtttgac
tatgatggaccctccatgaagacttcagttcctggaacacgatcacaagagctcacaaag
cagctgggagacattcagaatgttggtgcaatcaacttcttctgtaactatgacgagagc
agagggaactacctggtggatgtggatggaaaccgcatgctagatatctacactcagatc
tcctccatcccaatcggctacaaccaccccgctctcctcaaactgatgtccaatcccaac
aatctgagtacacttgtgaaccgacccgccctgggaatccttcctccggagaactttcca
aacaaactcactgaaagtcttctctcagtggctcccagtggaatgggtcgtgttcagaca
atggcctgcggctcatgctccaatgagaatgcttacaaagcaatgtttatctggtacagg
aacaaggagcgaggccacaacataccgtctgatgaagacctcagcagctgcatggtaaac
caggtcccaggttgtccagaactcagtattttatctttcatgggagctttccatggaaga
acgatgggttgcttggcaacaacacattctaaagcaatccacaagctggatgtgccatcg
tttgattggccgatcgctccgtttcccaaactgcagtacccgctggaggaattttcaaga
gagaatgcccaggaggaggctcgctgtctggaggaggtggaggacctgatcgtgaaatgg
aggcagaaggggaagcctgtagctgggattgtaattgaaccaatccaggctgaaggtgga
gataaccacgcctccccagacttcttcagaagccttcgcaacattgcatgcaagcatggc
tgtgctttccacgtggatgaagtccagactggtggagggaacacaggaaagttttgggct
catgagcattggggcatggatgaccctgcggacattgtgtccttcagcaagaagcttctc
actggtggctactaccacaaagacgaattacaggctgataagccgtaccgcatcttcaac
acgtggatgggtgacccatcaaagaacttactcctggctgaggttctaaatgtgattaga
aaagaaaatcttctggaggaggtgacccgctctggaaaagccctgataaacggcctttat
gaactacaggctcagtaccccggcatattgagtcgagctcgaggacaggggaccttctgt
gccattgatatctgtgatgatgcaacacgcagcagcatcctgctcaaggccagagacaaa
ggtgtccttctgggagggtgtggggatcgatcgatccgtttccgtcctgcgctggttttc
aaggattaccatgtgcacatcttcctcaacatcttcaatgaggtgttggcccagcacaag
taa
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