Cyclopterus lumpus (lumpfish): 117735695
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Entry
117735695 CDS
T09199
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117735695
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Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
117735695
NCBI-ProteinID:
XP_034396408
Ensembl:
ENSCLMG00005022044
UniProt:
A0A8C3AV22
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Position
8:complement(6057798..6060308)
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AA seq
586 aa
AA seq
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MSLLTVCVSAGLMLFFPQCSYQSCTEGTAKQCKDAEFAPGTNLAGEGFDITKMERKGAFV
LNMNQWKRKDKTCTLCSNPFLESKKQKLPLSVVDWRPKQSCSMKVATALHRSSESLVSSS
TSSVENNWETNLDVDVGNQGASLMLAGTHSKLAGYSMGKTKSDKFSFTSHSMSCEFYSYR
VSGSPKLHREFKKAVKQLPKMYSPENKQQFYKLIDNFGTHYVTKVKIGGSIRSVTSIRQC
QANLDGISIEEVKMCLEVEASSSIKATIKTQAKHCQNDIDKTESKTSFSSLFNDRFTETK
GGQTTEPDLLFSADKNPSAYKEWLNTLPQYPDIVSYSLDSLHELLPTSNSVRKNLRSAIS
HYILEKGLLKNCSGHCQSGIKSEPRDTCVCQCHNDPAVNQDCCPTRKGMARVIITVQRAS
GLWGDHSTATDGYVKVSFNGLMVGRSPVINNNNNPHWNMVVDLGSQDVSSGKKVRFEVWD
EDNKWDDDLLGSCEKVMSAGVKEDLCNLQHGQLFYKLEVKCAPSLSGDTCTAYKPSPISQ
SLKSLYVSRHAHPVPKAILLKMGVFVDETSSNQRNLTAEISKFDVI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttgactgtgtgcgtctctgccggcctcatgctgttcttccctcagtgctcg
tatcagtcatgcacggagggaacagccaagcagtgcaaggatgcagaatttgctccgggc
accaatttggccggggaaggctttgatatcaccaaaatggagcgtaagggagcctttgtg
ctcaacatgaatcagtggaaacgcaaggataaaacatgcaccctgtgcagcaatcccttt
ttagagagcaaaaagcaaaagctcccgttgtcagtggtggactggagaccgaagcagtcc
tgcagcatgaaagtggccaccgcactccaccgatccagtgagtcactggtcagctccagc
acctcttctgtggagaacaactgggagacaaatctagatgttgatgtgggtaatcaaggc
gcctcactgatgctcgctggtactcattcgaaactggctggttactccatgggaaaaacc
aagagcgacaagttcagcttcacaagccacagcatgtcctgtgagttctacagctacaga
gtgtccggcagtcccaagttgcaccgagaatttaaaaaagcagtgaaacagctcccgaaa
atgtacagccctgaaaacaagcaacaattttacaaactgattgacaacttcggcacccac
tacgtcaccaaggtgaagataggaggaagtattcgctctgtgaccagcatccggcagtgc
caggccaacctggacggcatcagcatagaggaggtgaagatgtgcctggaagttgaggcg
tcctctagcatcaaagccacaattaaaactcaagcaaaacattgccagaatgacattgac
aagacggaaagtaagacgtccttctccagcctcttcaacgacaggttcacagaaacaaag
ggggggcagaccacggagccagaccttctcttctctgctgacaaaaatccatcggcctac
aaagaatggctgaacacgctaccacaatatccagatatagtctcgtattccctggactcg
cttcacgagttactgcccactagcaactctgtcaggaagaacctgcgctccgccattagc
cattacatcctggagaaaggcctgttaaagaactgcagtggccactgccagtccggcatc
aagagcgagccacgggacacctgcgtctgccaatgccacaatgacccagctgtaaaccaa
gactgctgtccgacccgtaagggcatggcacgggtcatcataactgtgcaacgggcttct
ggtctttggggagaccactccacggccacggacggctacgtgaaggtgtccttcaacggc
ctgatggtcgggcgttcgcctgtcattaacaacaacaacaacccacactggaacatggtg
gtcgacctgggctctcaagatgtgtcctcgggaaagaaagtgagatttgaagtgtgggat
gaggacaacaagtgggacgacgacctgttgggatcatgtgagaaagttatgtccgctgga
gtcaaggaggatctctgtaacctgcaacatggccagctgttctacaaattggaggtgaaa
tgtgctccgagtctgagcggagatacatgcacggcctataaaccttcgcctataagtcaa
agtctgaagagcctgtatgtgtctcgccatgcacaccctgttccgaaggccatcctgttg
aagatgggcgtgtttgtggatgaaacaagctcaaaccagagaaacctcactgctgagatt
tcaaagtttgatgtgatataa
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