Cyclopterus lumpus (lumpfish): 117735711
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Entry
117735711 CDS
T09199
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117735711
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117735711
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
117735711
NCBI-ProteinID:
XP_034396424
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Position
8:complement(21348615..21359182)
Genome browser
AA seq
2167 aa
AA seq
DB search
MQSFRERSGGYHSNQPCYQQESHELSRLETYRQHPHHPHPQHPLPSPGPHPGPGPGHSRT
GYEAHSLANPTSMTPAGGPVTGGGPKDCYSQQAYPGYPGNVGGNESGNGGSAPSQTKKAY
RGSKVPPPNPSQHLQGPGAYSNHMGPGSYSAQYLSEGQLQQKWEDSAQLAQYDQEMVGRI
EAGGTPAPVSSQYIDQTMLGHTQTQCHQPSTPAYTSPHHQAHPPNPAPSPLMYPQSHLHY
PQHSASPSPYMEKCSPMPHCYKGYSIPSNSQYGRQMSSHSSLKPGGYRSTQNSYGYQQPP
SRGYEQQPPLQAMTNPQEPHPKYQHYSQPQQNYCLSELSVRSPEQYYQTCSPSSSHSPAR
SVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSVGMQEQASTNTMLMPPRPH
PSPNVPHAAPHSYTTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSE
ALVANKKGGKRSSGGSNSSAGSGASIKKGEEYKCPPYPDSGGSGSIGGGPMQDPYSTPQH
QPLPMELHEGGYSSSSDEQLERGYYYCGQGRSPAQAPNNTQLSLDTASSCSMTSPDDMST
RSGDSGLHNLTPDPTQCRSGQGGDGMNTPVKSIGDERSPTSITIPSPMKQERDSPLDIQH
INEPVKENFEESAWTEKSADKEEVSTEKSPDSERDSDTTKSTENLEKWSDEEKCPALYSK
VNKGMTEKIYCYKETLYQTVQSKYDPDTRDSVEQSPAALSDSSHKEHFGHEMKIEAFKSE
SPTASESSVKTLPFISRGDLEQDQYSTEKEDSSENTSPTQVKALDESNSVKRESRDEEDE
EEGEEDESAQDEAEEEGEGEILKQQHSLSSPLSVGVRGELEEGEKVSLTEDYINRDGQEK
SSGDLCSRTEGQSTELHTDNEPAAHPNAAAADASAWESAIGDTAPQPQSAMPVFSALNDK
TTPPAQARDHIDHSDAKVLEPDSPQLPGKSILPSPPSWADTPPSPQKGDEDMELGISCAS
AVTPLAKPEPVAPSAQPRAFGRKHARGRRRIMHSGVGIRRHLILEREGEREEEGAPSLTQ
KPCIPASKTMLFSDPLDLHQESIVSQTPKMLTDGFRSRMCTRSFNAPDLPPKVEPHVKRK
PGPKPGSKAGLKPGTKTGVKPGPKPGLKPGLKPGPKPGPKHIPKSGPKPGPKPVLNELEP
PQKIETPVKRKPGPKPGSKTGPKSGSKTGLNPSLKPALKPGPNPGPKHTDVLLPDDTAPI
KASVGRPKGSVSKAKLVQEEETIQPLTGLQSAAKKSQKALTAQVTQDAKPVNQDEKQVNH
EVTAPEKEGKNMVLRSRKPSQEKLSKEKVTGEDIFPQTLTDDSPKVEEPVYVEQTPTSIP
YAVKNTDVSADPLATIPTPVLTEQSEVKTLLPLKQKSSPELSTTPAKKKRGPKPKPKPLS
PQPSLVEQVVSTLKEKGVRGPKRKRGPPKKVSVVTPPPKDTPPNTSETDITSDVPVVPPQ
CPTKTKVLPPRKGRGQKYEAMVQKITSPSSKKHLPIPQMDSNLCDDVTPRALPPLLKEGE
PSMLINSIEVIEGKVKSIDSRQEVLKQLEGVVRKKEMAQGRYASTAEEVRQGMEEGIENK
EETGQEHIKPGVQHGVRADKVWSSMEAPVEARSLGEWTQQASKGVSSAPTKSTRTKRKRW
AMVESTDASIVALEAGSLIVTTPRLAKQRAIKNNHEMHLKQRRKKRKGQAPLEETETVEE
KNIESVEQQERVGETVTPTESTIPLPISVDEITEAPQVTSRELIQKPKRGRKPSANPTQR
KRGKTSEQIPGKPMKIHKKPGPKPGMKDAMEVIEAVVRAAGFERDEKEEREKEEMERRET
EETDKVETRIVGPVVTISEKQTEIISVKRIRRKPVHQSSKLSFCPYVRINNSRDFSSWCA
IVNKPEDAVVFQRRRKKGILRMRNPITVAKIVPHTAAMLQGPLVKINLIDRCLTCCLCGK
PANYRDLGDLCGPYYTEDGVPRKMLTMEHTESVREETQKTNDNNSSSSEEPSSSKSEGDG
STEKESNTEAFTQEGSSSRHHWRYRRAERTERTGQESGPRRLTLRERFRRMKQLQAISTG
ASSDQEGGDSMFKRLQVEAEAKEHWAHENCAIWTKGVIMVAGRLYGLREAASNSAQMAAH
STRMISL
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcggtggttaccacagcaaccaaccctgctaccagcag
gagtcccatgaattatcccgcctggagacctaccgacaacacccgcatcatccccacccc
cagcacccgctcccaagccccggtccacatccaggcccaggccccgggcacagcagaaca
ggctatgaggctcattcgctggcgaaccccacgagcatgactccggctggaggaccggta
actggaggaggacccaaggactgttatagccagcaagcataccctggttacccaggcaat
gttggagggaatgagagtggaaatgggggctcagcaccttcgcagacaaagaaagcctac
agaggaagcaaagtgcccccaccaaaccccagtcagcacctacagggtcctggggcctat
agtaaccacatgggccctgggagttactcagcccagtatttaagtgagggccaactccag
cagaaatgggaggactctgcccagttagcacagtatgaccaggagatggtggggcgtata
gaggctggtggtacccctgcacctgtctcctcccagtacattgaccaaaccatgctgggc
cacacccagacccagtgccaccagccctccacccctgcctataccagcccccaccatcag
gcccacccccctaaccctgccccttcccctctcatgtatccccagagtcaccttcactac
ccccagcactcagcctctccttcgccatacatggaaaagtgtagcccaatgccccactgt
tataaaggttacagcattccctcaaattcccagtatggcagacaaatgagcagccacagc
agtctgaagccggggggttacaggtcgacccagaacagttatggctaccagcagcctccc
tccagaggttatgagcagcagccccctttacaggccatgaccaacccccaggagccccac
cctaaataccaacactacagccaaccacaacaaaactactgtctctcagagctgtctgtc
agatcaccagaacagtattatcagacttgtagcccctcctcaagccactctccagcacgc
tctgtaggacgctccccctcgtacagctccaccccttcaccactaatgaccaatccagag
tcattccagtatggtcaacctcctatgacccctggggcagcatcctcctcttcgtcctct
tcagttggcatgcaggagcaagccagcaccaataccatgttgatgccccctcgcccacac
ccctcgcccaatgtgccccatgcagccccccacagctacaccaccacaccgcaggtcccc
accatgaaagaacgcttctcggagaagctgttgtcaaaccccagcttgtggagtctgaat
gccctcacctctcaggtagagaacatctctaataatgtccagcagttgctgctatcagag
gccctggtggccaacaagaaaggtggtaagcgcagcagtggaggtagcaacagcagtgct
ggaagcggagcatctatcaagaagggtgaggagtacaaatgtcctccatatccagatagt
ggtggtagtggtagtattggtggaggcccaatgcaagacccttactctaccccacagcac
cagcctttgccaatggaactccatgagggaggctactccagcagtagtgatgaacaactg
gagaggggttactactactgtggccagggcagaagtccagcacaggctcccaataacaca
caactcagcctggacacagcctcttcatgctccatgacttctccagatgatatgtccacc
aggtctggagactcaggactgcacaaccttacccctgaccctactcaatgtcggtcaggg
cagggaggggatggcatgaatactccagtaaagagcattggcgatgagaggtctcctaca
agcattacaatccccagtccaatgaaacaagaaagggactcccctttagatatacaacat
atcaacgagcctgtcaaagagaactttgaagaatcagcctggacagaaaaatcagctgac
aaagaggaggtatcaacagagaaatctcctgacagcgagagagattcagacacaactaaa
tctacagagaatctggagaaatggtcagatgaagagaaatgtccagctctctacagcaaa
gtaaacaaaggaatgacagaaaaaatatattgctacaaggagacattgtaccaaacagtc
cagagcaaatatgaccctgatacaagagactcagttgaacagtccccagcagctctctct
gactccagccacaaggaacactttggccatgagatgaaaatagaagcgttcaaatctgag
tctccaactgcatctgagagctcagtcaaaacattgccttttatatctagaggtgacctt
gaacaggatcaatattccacagagaaggaggacagctcagagaacacctctccaacccaa
gtcaaggccttggacgagagcaactcagtcaagagagagagcagagatgaggaagatgaa
gaggagggggaggaggatgagagtgcacaggatgaggcagaagaagagggagaaggagaa
atactgaaacaacaacattctctttcctctcctttgtctgtaggggttaggggggaactg
gaggagggggagaaagtgtcattgactgaggattacattaacagagatgggcaagagaag
tcatctggggatctctgcagcaggacagagggtcagagtacagagctccatactgacaat
gagcctgcagcccatcccaatgcagcagcagcagatgcttctgcatgggagtcagccatt
ggtgacactgctcctcagcctcagtctgctatgccagtcttctcagcgctcaatgataag
acaacacctccagctcaggccagggatcatattgatcacagtgatgctaaagtgctggag
ccagactctcctcagctgccagggaagtcgatacttccctcacccccctcctgggcagac
actccaccctccccccaaaaaggggatgaagacatggagctgggcatcagctgcgccagt
gcagtgactcccttggccaagccagaacctgtggccccatctgctcagccgagggcattt
ggacgtaagcatgcaaggggtagaagaagaatcatgcattcaggtgtgggaatcaggcga
catctaatcttggagagggagggagaaagggaagaggaaggagctccctcgcttacacag
aaaccctgcatccctgcaagcaaaactatgttattctcggatccattggacctccatcag
gaatctattgtaagccagactcccaaaatgctaacagatggttttcggtcgagaatgtgc
actcgctcattcaatgcaccagatttgccacccaaagttgagcctcatgtgaagagaaaa
ccaggcccaaaaccaggttcaaaggctgggctcaaaccagggacaaaaacgggagtaaag
ccaggtccaaaaccaggtcttaaacctggccttaagcctggaccaaagccagggccaaaa
catatacctaaatcaggacctaaaccaggaccaaaacctgtgctaaatgaattagagccg
ccacagaaaattgaaacacctgtgaaacgaaaaccaggacccaaaccaggctcaaaaact
gggccaaaatctggatcaaaaactggactaaaccctagtctaaaaccagctctaaagcca
ggtccaaatccaggacccaagcatacagatgttttgcttcccgatgacactgcacccatc
aaggcctcagtgggtcgccctaaaggctcagtttctaaggcaaagctggtacaggaagaa
gaaaccattcaacctttgacaggactgcagagcgcggccaagaagagccaaaaagcttta
acagcacaagtaacccaggatgctaaaccagtaaaccaggacgaaaaacaagtaaaccat
gaggttacggctccagagaaggagggtaagaacatggtcttaagatccagaaagccctca
caagaaaaactgtctaaagaaaaagtcacaggggaagatatttttccccagacactaact
gatgattctccaaaagtagaggaacctgtttatgtggaacaaactccaacttccattcct
tatgcagtcaaaaacacagatgtttcagcagacccacttgcaacaattcccacaccagtc
ctaacggaacaatctgaagtaaagacattacttccattaaaacagaaatctagcccagaa
ctttctacaacaccagcaaagaaaaagaggggtccaaagcccaaaccaaaacccttatca
cctcaaccatctctagtggaacaggttgtctctacactgaaagagaagggtgtccgtggc
cccaaaagaaagcgagggccacccaagaaagtctctgtggtcactcctccacccaaagac
actcctccaaacaccagtgagacggacatcactagtgatgtgcctgtggtgcctcctcaa
tgccccacaaaaacaaaagttctcccaccacgcaaaggcagaggacagaaatacgaggcc
atggtgcagaaaattacatctccaagctcaaagaaacacctcccaattccccagatggac
agcaatctatgtgatgatgtgacgcccagggctttgcctccactcctaaaggaaggtgag
ccatctatgctcataaatagcattgaggtgatagagggaaaagtaaaaagcatagattct
agacaggaagtactgaaacaacttgaaggagtagtgagaaaaaaggagatggcacaagga
agatatgcttcaacagccgaggaggtgagacaagggatggaagaagggattgagaataag
gaggagaccggacaagaacacattaaaccaggggtacagcatggtgtcagggctgacaaa
gtgtggagctcaatggaagctccagttgaagccaggtctctaggagagtggacacaacag
gcctcaaaaggtgtatcatctgctcccactaagtccaccagaactaaaaggaagagatgg
gccatggtggagagcacagatgcctcaatagtagccttggaagccgggagcctaatagtt
acaacaccaaggctagccaagcagagggccattaaaaacaaccatgagatgcatctgaaa
cagaggagaaagaaaagaaagggccaagcccctctagaagaaacagagacagttgaggag
aaaaacattgaatcagtagaacaacaggagagggtaggagagacggtaacccccacagag
tccacaatacctctgccaatcagcgtagatgagatcacagaagccccccaggtaaccagc
agagaactcattcagaaacctaagagaggcagaaaaccttccgcaaatcctactcagcgg
aaacgaggcaaaacctcagagcagattcctggcaagccaatgaagatccacaaaaagcct
gggccaaaacctgggatgaaagacgccatggaggttattgaagcagtagtaagggctgca
ggatttgaacgggacgaaaaagaggagagagaaaaagaagaaatggaaagaagggaaaca
gaggagacggacaaagtagaaacgcgtatcgtgggtcctgtcgtgacaatatccgaaaag
cagactgagatcatttctgtgaaaagaatcaggcgcaaaccagtccatcaaagttctaaa
ctgtctttctgtccttatgtacggattaacaactccagagacttttcttcctggtgtgcc
atcgtcaacaagcctgaggatgcagtggtatttcagagacgtagaaaaaagggcatactc
agaatgaggaatcctatcacagttgcaaaaatagtgccacacactgctgccatgctacaa
ggacccttggtgaaaataaatctcattgacaggtgtcttacatgttgcctgtgtggaaag
ccagcaaattacagagacctaggtgatttgtgtggaccctactacacagaggatggcgtt
ccacggaaaatgttgacgatggaacacacagaatccgtcagggaagagacacagaaaact
aatgacaacaacagtagcagcagtgaagaaccaagctcctcaaagagcgagggtgacggc
agcacagaaaaggagagcaatacagaggctttcactcaagagggcagtagtagcaggcac
cattggcgctaccggcgggcagaaagaacagagaggacgggtcaggagagtggtcctcga
agattaactctccgagagaggttcaggaggatgaagcagctccaggccatcagcacgggg
gcctcaagtgaccaagagggtggtgacagcatgttcaaaaggctacaagtggaggcagag
gctaaagagcactgggcccatgaaaactgtgccatctggaccaagggagtaattatggta
gctgggaggctatacggactgagggaggccgccagcaactcagcacaaatggctgcacat
tccacgaggatgatttctctataa
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integrated database retrieval system
