Cyclopterus lumpus (lumpfish): 117735768
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Entry
117735768 CDS
T09199
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
clum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117735768 (gle1)
03015 mRNA surveillance pathway
117735768 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117735768 (gle1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117735768 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
117735768
NCBI-ProteinID:
XP_034396450
Ensembl:
ENSCLMG00005008417
UniProt:
A0A8C2XDP7
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All DBs
Position
9:complement(2362675..2377711)
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AA seq
710 aa
AA seq
DB search
MPAENLRWETLRALKNSSKGQIKFDPYWSERGEDILAGCKEALSLSPQSGVILERLASFP
LQKSCFLSSSSGGSSPGLFDENSASLSSSGSVSDLHAGRAAPSAAASLNAEREQAVVDEA
KDEDAEEDVGDVHSPASPPAISLLSPKAMETDGRIIKFEEEQREKAKMALKRRQEMHERL
VAVVASSESEQLKRFEEFMELKQRQEFQSMRDMMDRETKESIGRQEKLKEEQRHRMKIIN
LRLREAEQQRLREAELQRQRQADGRERLRNLNSIQEEILQLNQLMEPSTQTSLGSYCTRG
NQLCSQLSEVVRKTAEGEFPSMEDMTVAERALHEMRALMQEEVAKAQDKKKRDEEQEEQR
RKQEELQALQEAQKKAAAESAKEKAKRKGLQNSAEEGTLKWFKELQESAARCAQAFEQLN
AAKDAQAKKLKLELQKAASIPVCQISSNSGSQLRDIFNRLDKLLAGRAVVSGGRNVCTSQ
HPQGLDFVSFKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWEVHPRVGELILAHLHKKC
PYAVPHYPPMKDGTTVDDYQRILGYRVDDSGVEGQDSFLKRMSGMIRLYAAIIQLRWPYG
SKQGAAPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCGHALMKQYQSQFWKLILLL
KEEYFPRIEAVASSGQMGSVIRLQQFLETSLQSRQIRPPKGQLTSMFWGS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgagaatctgcgatgggaaactttacgggcgttgaagaactcctcgaaggga
caaatcaagttcgacccgtactggtccgagcggggcgaggacattctggccggctgcaaa
gaggccctcagcctgtctcctcagtccggggtcatcctggagcgcctcgcctcgttcccc
ctgcagaagtcctgcttcctgagctccagctccgggggttccagccccggcctcttcgac
gagaactcggcctcgctctcctcctcggggtccgtctccgacctccacgccgggcgcgcc
gcgccgtccgcggccgcgtctctgaacgccgagcgcgagcaggctgttgttgacgaggcg
aaggatgaagacgcggaggaagatgtgggcgatgttcacagtcctgcgtctccaccggcc
atttccctgctgtcgcccaaagccatggagacggacggccgcatcatcaaatttgaggag
gaacaacgagaaaaggcgaagatggcgctcaagcggcggcaggaaatgcacgagaggctg
gtggccgtggtggcgagctccgagtcggagcagctgaagcgcttcgaggagttcatggag
ctgaagcagaggcaggagttccagagcatgagggacatgatggaccgagaaaccaaagag
agcatcgggcgtcaagagaagctgaaggaggagcagcggcacagaatgaagatcatcaac
ctgcgtctgagggaggcggagcagcagcgcctgcgggaggcggagctccagcggcagcgg
caggcggacggccgcgagcgtctgcgcaacctcaacagcatccaggaggagatcctgcag
ctcaaccagctgatggagccgtccacccagaccagcctcggctcctactgcacccgcggg
aaccagctgtgctcccagctgtcggaggtggtgcggaagacggcggagggagagttcccc
agcatggaggacatgaccgtggccgagcgagccctccacgagatgcgggcgctgatgcag
gaggaggtggccaaggcccaggacaagaagaagagggacgaggagcaggaggagcagcgc
cggaagcaggaggagctgcaggcgctgcaggaggcgcagaagaaggcggcggcggagtcg
gccaaagagaaggccaagaggaaaggtctgcagaacagcgctgaagaaggaacgctgaaa
tggttcaaggagctgcaggagtcggctgctcgctgtgcgcaagccttcgagcagctcaac
gccgctaaagacgcccaggcgaagaagctgaagctggagctgcagaaggcggccagcatc
cccgtctgtcagatctccagtaactccggatcgcagctccgtgacatcttcaaccggctc
gacaagctgctggcgggccgcgcggtggtgtcggggggcaggaacgtgtgcacctcccag
catcctcagggcctcgacttcgtgagcttcaagctggccgagaagtttgtgaaacaagga
gaagaggaggtggcgtctcaccacgaggccgcgttccccatcgccgtggtggcgtccggc
atctgggaggtgcaccctcgggtgggcgagctcatcctcgcccacctgcacaagaagtgt
ccgtacgccgtgccgcactacccgcccatgaaggacggcacgacggtggacgactaccag
aggattcttgggtaccgcgtggacgactccggggtcgaaggtcaggacagtttcctgaag
aggatgtcggggatgatccgtctctacgccgccatcatccagctgaggtggccctacggc
tccaagcagggggcggctcctcacgggctgaatcacgggtggcgctggttggctcagatg
ctcaacatggagccgctcgctgacatcacggcgacgctgctgttcgacttcctggaggtt
tgtggccatgcgttgatgaaacagtatcagagccagttctggaaactcatcctgctgctg
aaggaggagtacttccccaggattgaagccgtggcgagcagcggacagatgggctcggtc
atcagactccaacagttcctagagacgtcgctgcagagccgacagatccgtccgcccaaa
ggtcagctgacctccatgttctggggctcgtga
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