Cyclopterus lumpus (lumpfish): 117735888
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Entry
117735888 CDS
T09199
Symbol
adamts13
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117735888 (adamts13)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
117735888 (adamts13)
Peptidases and inhibitors [BR:
clum01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117735888 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Adt-1
TSP1_CCN
Reprolysin_3
Reprolysin_5
TSP1_spondin
Reprolysin_4
Reprolysin_2
Peptidase_M10
CUB
PAS_7
Motif
Other DBs
NCBI-GeneID:
117735888
NCBI-ProteinID:
XP_034396685
LinkDB
All DBs
Position
9:complement(11193819..11205477)
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AA seq
1329 aa
AA seq
DB search
MASELGSVLLKRRITCCPGVKAEQADPQEEGNMFFTTLLCLLSLRPGFAALMNSPLDEHF
HHPPSQRDVVSSPDASGNGRLRRWALMPDITHLELLVVVGPDVQQVHKQDTERYILTNLN
IASELLRDTALGANMRVHLVRMIILSEPEPEIQMSPDITSSLRSVCDWGRRINPSNDTDP
LHADLLLYITRYDLVLPDGNSLVRGVAQLGGACSSEWSCVITEDTGFDLGITITHEIGHS
FGLYHDGVGNTCSRSGFIMASDGGYNSVDLTWSSCSRQELLTFFSDGEAECVKDLPALGG
SLQDWKPGLYYGVDDQCRIAFGSTARACSFTNPDLVTCRVLSCHINPDDNSSCKRLLVPL
LDGTECAPNQWCLKGRCVSLDELSSSVVVHGSWSNWSEFSPCSRTCGGGVTHRTRKCNNP
RPAFGGNDCEGSDIEAGLCHQQACELTQLDFMAEQCSQTDHHPLYLLPNTATFYTWIPAI
GFAQGDEQCRYMCQSKGENFIVSRGSQFVDGTRCETDSPPHFGSTAACLRGKCQLFGCDG
VLHSGKVRDVCGVCGGDASSCSLTADSYTSGQAREYTPFLSLPVNATQVYIVNRAPLFTH
MAVMVGDRYIVSGTGNMALTTTHPXPLDDNHLEYHLHLTPDLLPEMEELLLPGPLSEEIH
VQVYRKYGKEYGEKTNPNISYHFYVPIRNSDLTDISSDGKWAVFTTPCSVSCGSGVQKQV
YVCVDEDTNNHLEEHNCETPPPARTASTQPVSCPPVPPDGGASEPGECSAVCGPGEANAT
CHVSGQKMCEDVEVDQRVCSLKIKPTDSVPCVVDVCPIGWQSKAEVNAKVGVSPRSKQAP
VYVWSPVISQCSKTCGNGTLQVWFSCVDHQTRLRVTDIHCDASTKPPPQSETCNTSPCPP
LWRSKQGVCSVTCGGGVANRVLYCAVETEVEEEVVEDSECSEFPKPTSSGFMVKLLKYCN
WSRWKKFGASPCSASCDLGVAQRTVSCVQFVLGTESAVPEESCYAAVKPATTVPCLVQVC
TFRWEVKAWSQCSVPCGYGIQSRAVSCMGPSKPEPLSPLFCMHMPKPITIQGCYLGGCLR
RSTHWIIFLQVQQSKYPFHRPLQQAPQQSKPSACGQLLLEKSGTVDLKDVTGRCLVSIGR
PLDEVIHIKVESGSLNCRKKEYVAFVDRMALVEVASRXWASELTTRTNVLLVRQRMLTPG
NGVVFTYNSHKKLKKSHHQDCDVQLFSPTGVFENPTTSNTNHTCRVLINAPPAVKIRIQA
LHIGPVFNATNSQSTYIMIRDMDVLKTNVFKGRQLFQWHSSGNMAEIEFHGDYLHSKGSF
RAEYSFFRL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgagctgggctctgtcctgctgaagaggaggatcacatgttgtcctggtgtt
aaagcagagcaggccgacccacaggaagagggaaacatgttttttacgaccctgctctgt
ctgctgtcactgcggcctggtttcgccgctctaatgaattctccattggacgagcatttt
catcacccccccagtcaaagagacgtagtttcatctcctgatgcctcagggaatgggcgg
ctgcgtcgttgggcgctgatgcctgatatcacacatctggagctgctggtagtggtcggg
cctgatgtccagcaggtccacaagcaggacacagaacgctacatcctcaccaacctcaac
atcgcctcagagctgttgagagacaccgccctgggtgccaatatgagggtgcacctggtc
cgcatgatcatcctgtcagagccagagccagagatccaaatgtctcccgacatcacctcc
tccctcagaagtgtgtgtgactggggccgaaggattaacccctcaaacgatacagaccca
ctccacgctgatcttctgttatacattacacggtacgacctggtgttgcctgatgggaac
agtctggtcaggggtgtagcgcagctgggtggtgcttgctccagtgaatggagctgtgtg
atcacagaggacacgggctttgacctggggatcaccatcactcatgagattggccacagt
tttggactctaccatgacggagtaggaaacacctgcagcaggagtgggttcataatggcc
tctgatggcggctacaacagtgtggatctgacctggtcttcctgcagcagacaggagctg
ctcacattcttcagtgacggtgaagctgagtgtgtaaaggacctgccagcactgggaggc
tccctacaagactggaagcctggtctatactacggagttgatgaccagtgtcgtatagct
tttggtagcactgcaagagcctgttctttcaccaatcctgacctggttacttgtcgtgtc
ttgtcctgtcacattaaccccgatgataacagctcctgcaaacgcctcctggtcccactg
ctggacgggacagagtgtgcacctaatcagtggtgtctgaaggggcgttgcgtgtcctta
gatgagctcagctcttctgtggtggtgcatggctcctggtccaactggtctgagttctcc
ccttgctcacggacatgtggtgggggagtcactcaccgcacacggaaatgcaataaccca
agacctgcttttggtggaaatgattgtgagggatcggatattgaggctggactttgtcac
cagcaagcatgtgagctcacccagctggatttcatggcagagcagtgttcccaaacagac
caccaccccctctacctgctaccaaacactgccaccttctacacctggatccctgctata
ggttttgcacaaggggatgagcagtgcagatatatgtgccagtcaaaaggagaaaacttc
atagtaagccgtggctctcagtttgttgatgggactcgctgtgagaccgacagcccacct
cactttggctccacagctgcttgtcttcgagggaaatgccagctgtttggctgtgatggt
gtgctgcactctgggaaagtgagggatgtgtgcggggtgtgtggtggagatgcatcctcc
tgcagtttgaccgctgactcctacactagcggtcaggccagagagtataccccattccta
tctctgccagtgaatgccacgcaggtttatattgtcaacagggcacctctcttcactcac
atggcggtcatggttggtgatcggtacattgtgtccgggacgggcaacatggcactgact
acgacccaccccntcccactggatgataaccacctagagtaccacctccacctgacccct
gaccttttgcctgagatggaggagctgctgctgccgggaccgctgtcagaagaaatacac
gtgcaggtctatcgcaaatatggaaaagaatacggagagaaaactaatccaaacattagc
taccacttctatgtacctatcagaaacagcgacttgacagacatctcatcggacggaaaa
tgggctgtcttcacaacaccctgctctgtctcctgtggatccggtgtacagaagcaggtt
tatgtctgtgtagatgaagacaccaataaccatttggaggaacacaattgtgaaacacct
cctcccgcccgtactgcttcaacacaacctgtcagctgtccccctgtccccccagatggc
ggagcgtcggagccaggggagtgttcggcagtgtgcgggccaggagaagctaacgcgacg
tgtcatgtgtccggccagaagatgtgtgaagatgttgaagtggatcaacgggtttgttct
ttgaagatcaaaccgactgattctgtgccctgtgttgttgatgtttgtcccattggatgg
caatctaaggcagaggtaaatgctaaagtcggtgtgtcgccacgctctaaacaggctcct
gtgtatgtctggagtcctgttatcagccagtgctccaagacctgtggcaatggaaccctg
caggtgtggttctcctgcgtggaccaccagaccagactcagggtgacggacatccactgt
gatgcttctaccaaacctcctcctcagtctgagacctgcaacacatctccttgccccccc
ctgtggcgctctaagcaaggagtctgcagtgtaacatgtggaggaggggtggccaacagg
gtgctgtactgtgctgtggaaacagaagtggaggaggaggtggtggaggattcagagtgc
agtgagtttcccaaacccaccagcagtggtttcatggtaaaattattaaaatactgtaat
tggtccaggtggaagaagttcggtgcatcgccctgctcagcgtcctgtgacttgggtgta
gctcagaggactgtgtcttgtgtccaatttgttctcggcactgagagtgcggtgccggag
gaaagctgctatgcagctgtgaaaccagccaccacagtgccctgcctggtgcaggtctgc
accttcagatgggaggtgaaagcatggagccagtgctcagtaccgtgtggatatgggatc
cagtccagagccgtgtcctgcatgggcccctctaagccggagcccctcagccctctgttt
tgtatgcacatgcctaaacccatcaccatccagggctgctatttgggcggctgcttacgc
cgcagcacccattggatcatctttctccaagtccaacagagcaaatacccgttccacagg
ccactccaacaagcaccccaacaatctaaacccagtgcatgtggacagctactcttggag
aaatcgggcacggtggatttgaaagacgtgactggccgctgcctggtatccataggtcgc
cccctcgatgaggtcattcacattaaagtggaatctggctctttgaactgcagaaaaaaa
gagtatgtcgcatttgttgaccgcatggcattggtggaagtcgcgagcaggtagtgggct
agtgaactgacaaccagaaccaacgtcctgctggtgcgccaaagaatgctcacccccggg
aacggagttgtgtttacctacaattcacacaaaaaactgaagaagagccaccaccaggat
tgtgacgttcagctgttttcccccactggtgtctttgagaatccaacaacgtccaacact
aaccacacctgtcgagtgctcatcaacgccccacccgcagtcaagatcagaatccaagcg
ctacacataggaccagtattcaacgccaccaactcccagtcgacatacatcatgatccgg
gacatggacgtcttaaaaaccaatgtgtttaaaggccgtcagctgtttcagtggcactcc
tctggaaatatggctgaaattgaatttcatggagactacctgcattccaaagggagcttc
agagccgaatattccttttttcgtctttga
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