Cyclopterus lumpus (lumpfish): 117735892
Help
Entry
117735892 CDS
T09199
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament isoform X1
KO
K04572
neurofilament light polypeptide
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117735892 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117735892 (zgc:65851)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117735892 (zgc:65851)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117735892 (zgc:65851)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
TolA_bind_tri
HR1
DUF2594
Motif
Other DBs
NCBI-GeneID:
117735892
NCBI-ProteinID:
XP_034396694
Ensembl:
ENSCLMG00005018327
UniProt:
A0A8C3A7K5
LinkDB
All DBs
Position
9:complement(8521788..8527820)
Genome browser
AA seq
510 aa
AA seq
DB search
MSYSGDIYSSSSSYRKIFGDAPRSGRVGLGSSSSSPSRLHSAGYRSTHRTYGSPSAMSST
NYRRTAASGRLFSSMPDSAMDLTQTTAVTNELKIVRTNEKEQLQGLNDRFVSFIEKVHNL
EQQNKVLEAEVTMLRQRHNEPSRLHELYEQEIRELRARVEELTHERSQMHLDCVQMNDTL
EHVREKLEEETKLREEAENTLKSYRKDVDDATLARLELEKKVESLLDEIAFLRKVHEEEL
QELQASLQATQVSVEMDMSKPDLTAALKDIRVQYENLSARNQVQAEDWYRSKFASVNEAA
ARNQDAVKHSKEELSEYRRQVQARTLEIEALRGHNEALERQIAEMEDRHNNEMGDMQDTI
QQLEAALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVGGAMVQSG
YQGFSYMSARSYGLGAYRKSEARPEEEEEEAEEEGEEDEEDEEEGEENKEEGDDQEEGEG
EEDEEEEEEDEKQKEKEKKKETPAGKTSKS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccggcgacatctacagcagcagcagctcctatcggaagattttcggagat
gccccccggtccggccgcgtgggtctgggcagcagcagcagcagcccgtcccgcctgcac
tctgcgggataccgcagcacccaccgcacctatggttccccctccgcgatgtcctccacc
aactaccgcaggacagcggcttctggccgcctcttctcctccatgccggactctgccatg
gaccttacccagaccaccgcggtcaccaacgagctcaagatcgtccgcaccaacgagaag
gagcagctgcagggcctcaacgaccgcttcgtgtccttcatagagaaagtgcacaacctg
gagcagcagaacaaagtcctggaggcagaggtcacgatgctgcgccagcgccacaacgag
ccctcgcgcctgcacgagctgtacgagcaggagatccgcgagctgcgggcgcgcgtggag
gagctgacgcacgagaggagccagatgcacctggactgcgtgcagatgaacgatacgctg
gagcacgtgagggagaagctggaggaggagacgaagctgcgcgaggaggcggagaacacc
ctgaagagctaccggaaggacgtggacgacgccaccctggcgcgcctggagttggagaag
aaagtggagtcgctgctggacgagatcgccttcctcaggaaagttcacgaggaggagctg
caggagctgcaggcgtctctgcaggccactcaggtgtcagtggagatggacatgagcaaa
ccggacttgacggccgccctgaaggacatccgggtccagtatgagaacctgtcggccagg
aaccaggttcaggcagaagactggtaccgctccaagtttgccagcgtgaacgaggccgct
gcccgcaaccaggacgccgtcaagcactcaaaggaggagctgagcgagtaccgcaggcag
gtgcaggcccgcaccctggagatcgaggccctcaggggccacaacgaggccctagagagg
cagattgctgagatggaggatcgacacaacaatgaaatgggagacatgcaggataccatt
cagcagctcgaggcggcactgcgcagcaccaagggagagatgtcccgtcacctgcgcgag
taccaggacctgctgaacgtcaagatggcgctggacattgagatcgctgcctacaggaag
ctgctggaaggcgaggagtgccgcctcagctccgttggtggggccatggtccagtcgggc
taccagggcttctcctacatgtcagcccgctcctacggcctcggagcctacaggaagtct
gaggccaggcctgaggaggaggaagaggaggccgaagaagagggggaggaggacgaggag
gacgaggaggagggagaggagaacaaagaggagggagatgaccaggaggagggtgaggga
gaggaggatgaagaggaagaggaggaggacgagaagcagaaagaaaaggagaagaagaag
gagacccccgccggcaagaccagcaagagctaa
DBGET
integrated database retrieval system
