Cyclopterus lumpus (lumpfish): 117735905
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Entry
117735905 CDS
T09199
Symbol
tmc2b
Name
(RefSeq) transmembrane channel-like protein 2-B
KO
K21988
transmembrane channel-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117735905 (tmc2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117735905 (tmc2b)
03037 Cilium and associated proteins [BR:
clum03037
]
117735905 (tmc2b)
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117735905 (tmc2b)
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117735905 (tmc2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117735905
NCBI-ProteinID:
XP_034396709
LinkDB
All DBs
Position
9:complement(12189946..12202364)
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AA seq
965 aa
AA seq
DB search
MDATLLLQVENKKANFQPPEPLSPGSITMVTMGLLVGLEIDVVSGSGSEDEARRRIKNRR
AKPRCKSKPVSGHEVDEEDEEDESPRKRVRKKKAKPQESDEEDEEDNRSVKRKSSKASRK
KAMEESEEESEEDREKRKKRGTAVSKKEKEDQNKEKRGNVKGKQGKNMGGENDKKKKNGK
LSSSSSSSDSGEESLSEGEIAALKEQLEEKKKLIVTLRNKPWRMKKRLVLLKEAQKFVEE
FEGALGKGKGKKLYAFKVMMTKKLIKFKRDFENFKTACIPWERKIKDVESHFGSSVASYF
IFLRWMYGLNMVLFGFMFGLVVLPEILMGLPYGSIPRKTVPREEQDTAMDFSVLNDFEGF
CKYSFLFYGYYNNDRTIGVLKFRLPLSYLLVGVGIFGYSLMVVIRTMARNSNEGGDGAEE
GEFTFSWKMFTSWDYLIGNPETADNKFASITTSFKESIVDEQENQKDENIHLRRFLRVLA
NFLITCTLGGSGYLIYFVVKRSQDFAKMEQDKLSWLEKNEVEFVMSLLGLVCPPLFETIA
ELEDYHPRIALKWQLGRIFALFLGNLYTFLFALFDEVNEKLETEKSIRNATIWALNQYYA
NYSSYFNTTDVPPPNVSPADVIRGPCWENAVGIGFVKLVVSDIQVSYLTILVGDFLRAVI
VRFLNYCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGLNILRLLSSM
YYQCWAVMCCNVPHERVFKASRSNNFYMGLLLLVLFLSLLPVVYAIMTLSPSFDCGPFSG
QDKIYDVVMETIEQDLPSFIANIFTYATNPGLILPAVLLMLLALYYLNAVSKGYKQANMD
LKKKMKMARDEEKNRRNNKDSTNQVMIDLEDLLPKKSLIPPPIEEEPTPPGVVNAKGSKS
PKMKPGAAAKGVNLQKDVSLAAPNPRAPVTYAPGPRRGPAGNARGPQPGPSRGRGRAGPP
RRHDS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaacgctcctcctccaggtcgagaacaagaaggccaacttccagccaccagag
cccctgtccccagggtctatcaccatggtaaccatggggctcctggttgggttggaaatt
gatgttgtatcaggcagtggaagtgaagatgaggcaaggcggaggattaaaaacagaaga
gccaaaccacgatgtaaatccaaaccagtcagtggtcatgaggtggatgaagaggatgag
gaggatgaatcaccaaggaaaagagtacgaaaaaagaaggccaagccccaggaaagcgat
gaagaggatgaggaagacaaccggagtgtgaaaagaaaaagttcaaaagcttccaggaag
aaagctatggaagagagcgaggaggagagcgaagaggacagagagaaaaggaaaaagcga
gggacagccgtgtccaaaaaggagaaagaggaccagaacaaggagaagaggggaaatgtt
aaagggaaacaagggaagaatatgggcggtgagaatgacaagaaaaagaagaatgggaag
ttgagcagctcttcctcctcctctgattctggtgaagaatcgctgtcggagggagagatc
gcagccctgaaggaacagctagaggagaagaagaaactgattgttacgttaaggaacaaa
ccctggcgcatgaagaagagacttgtgctgctcaaggaggcgcagaagtttgttgaagaa
tttgaaggagctcttggaaaaggaaaaggaaagaagctgtatgcattcaaagtcatgatg
accaagaaactaatcaagtttaaacgtgactttgaaaacttcaaaacagcctgtataccc
tgggagaggaagataaaggatgtagaaagtcactttggatcatctgtggcatcctacttt
attttcctgaggtggatgtacggtctaaatatggtcctgtttgggttcatgtttggcctg
gtggttctgccagagattctcatgggtcttccatacggctccattcccaggaaaactgtg
cccagagaggagcaggacacagccatggacttctctgtgctcaatgactttgaaggattc
tgcaagtactcctttttgttctacggctactacaacaacgatcgaacgatcggggtgctg
aagtttagacttcctctgtcatacctgctggtgggagttggcatctttgggtacagtctg
atggttgtcataagaacgatggctcgtaactcaaatgaaggcggtgacggggcggaggag
ggagaattcaccttcagctggaagatgttcaccagctgggactacctgataggaaaccca
gagactgcagacaacaagttcgcctccattaccaccagcttcaaggaatccatcgtggat
gaacaggagaaccagaaagatgaaaacatccatctccgacgcttcctcagggttctggca
aacttcctgatcacatgcactcttggaggcagcggatacctcatctactttgtagtgaaa
cgttcgcaagactttgctaagatggagcaagacaaactctcgtggcttgaaaaaaacgag
gtggagtttgtgatgtctctgctggggctggtgtgtcctcctctgtttgaaaccattgca
gaattggaagattatcaccctcgtattgctctgaagtggcagctaggacgaatctttgcc
ctcttcctgggaaacctctacaccttccttttcgccctgtttgatgaggttaatgaaaag
ctggagacagagaagtccatcaggaatgccactatatgggctttgaaccagtactacgcc
aactacagctcctacttcaacacaacagatgtgcctcctccaaatgtgtccccagctgac
gtcatcagaggaccctgctgggagaatgcagtgggaattggatttgtgaagctggtcgtg
tcggacattcaggttagctatttgaccatcctggtgggtgactttctgcgagctgtcatc
gtccgctttcttaactactgctggtgctgggacctggaggccggatttccttcatatgga
gaatttgacatcagtggaaatgtgctggggcttgtcttcaatcaaggaatgatatggatg
ggagcattttacgctccaggcctggtgggtctgaacattttacgtctcctgtcctcaatg
tactaccagtgctgggcagtgatgtgctgtaatgttcctcatgagagagttttcaaggcc
tcgcggtccaacaacttctacatgggcctgttgctgcttgtgctgttcctcagcctctta
cctgttgtctacgccatcatgaccttgtccccgtcatttgactgtgggccattcagtggc
caggataagatatatgatgttgtcatggagactatagaacaggacctaccgtccttcatc
gccaacatctttacgtatgctacaaaccccggactcatcctgcctgctgtcctcctcatg
ctgttggccctctactacctgaatgccgtgtcaaagggatacaaacaagcaaacatggac
cttaaaaagaagatgaaaatggcgcgagacgaagagaagaatcgcaggaacaacaaggac
agcactaatcaagtgatgatagacttggaggacctgttgccaaagaagtctctaataccg
cctcccatcgaggaagagccaaccccacctggtgttgtaaacgcgaagggcagcaagtct
cccaaaatgaagccaggtgcagcggcaaagggggtaaatctgcaaaaggatgtgtcactg
gctgccccaaaccccagagctccagtgacctatgccccggggccaagaagagggcctgct
gggaatgccagggggcctcaacctgggcctagtcgaggaagaggtcgggctggtcctcca
aggcgacatgactcatga
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