KEGG   Cyclopterus lumpus (lumpfish): 117735929
Entry
117735929         CDS       T09199                                 
Name
(RefSeq) nucleolysin TIA-1-like
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117735929
   03041 Spliceosome [BR:clum03041]
    117735929
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     117735929
Spliceosome [BR:clum03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    117735929
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Calcipressin RRM_Nup35 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 117735929
NCBI-ProteinID: XP_034396739
Ensembl: ENSCLMG00005017873
LinkDB
Position
9:8321407..8332577
AA seq 388 aa
MMEDDLPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHKHA
SASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYESNSKHLSFEEVVSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPLPQQNKMSFPAA
AQPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQPWNQQGFNHLPASAGWTGMSAISNG
GVMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgatggaggacgatctacccagaaccttgtatgtgggaaatctgtccagggatgtcacc
gagcccctcatcctgcaagtcttcacacagataggaccttgcaagagctgtaaaatgata
gttgatacggctggaaatgatccgtactgctttgtggagttctatgaccacaagcatgcg
tctgcctcactggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtcaac
tgggccacgacgccaaccagccagaaaaaagacacaagtaatcattttcacgtcttcgtt
ggagacctcagcccagaaataactacagaagacgtcaaagctgccttcggtccatttggc
aggatttcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggacgcagagaacgccattcagcagatgggtggtcag
tggttaggaggcagacagattagaaccaactgggccacaagaaagccccccgccccaaag
accacctatgaaagtaactccaagcacctatccttcgaggaagtagtgagtcagtccagc
ccaagtaactgcactgtgtattgtggcggagtgagcacaggactgacagagcaactgatg
agacagaccttctctccctttggacaaatcatggaaatcagagttttcccagacaaaggc
tattcgtttgtgagatttaactctcatgagtcagcagctcatgccattgtgtcagtgaac
ggcacctcaatagagggccatatagtcaaatgctactggggtaaagagaccccggacatg
atgaacccgatgcagcagatgcctctgccccagcagaacaagatgagcttccctgcggca
gcccagccctacggccagtggggccagtggtacggcaacgggccccagatcagccagtat
gtcccgaatgggtggcaggtccccacctacggtgtctacggccagccttggaaccagcag
ggcttcaatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggt
ggggttatggagcctacacagggattgaatgggagtatgctagccaaccagcccggtatg
ggagccgcaggataccccacacactga

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