Cyclopterus lumpus (lumpfish): 117735929
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Entry
117735929 CDS
T09199
Name
(RefSeq) nucleolysin TIA-1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117735929
03041 Spliceosome [BR:
clum03041
]
117735929
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117735929
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117735929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
117735929
NCBI-ProteinID:
XP_034396739
Ensembl:
ENSCLMG00005017873
LinkDB
All DBs
Position
9:8321407..8332577
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AA seq
388 aa
AA seq
DB search
MMEDDLPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHKHA
SASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYESNSKHLSFEEVVSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPLPQQNKMSFPAA
AQPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQPWNQQGFNHLPASAGWTGMSAISNG
GVMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatctacccagaaccttgtatgtgggaaatctgtccagggatgtcacc
gagcccctcatcctgcaagtcttcacacagataggaccttgcaagagctgtaaaatgata
gttgatacggctggaaatgatccgtactgctttgtggagttctatgaccacaagcatgcg
tctgcctcactggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtcaac
tgggccacgacgccaaccagccagaaaaaagacacaagtaatcattttcacgtcttcgtt
ggagacctcagcccagaaataactacagaagacgtcaaagctgccttcggtccatttggc
aggatttcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggacgcagagaacgccattcagcagatgggtggtcag
tggttaggaggcagacagattagaaccaactgggccacaagaaagccccccgccccaaag
accacctatgaaagtaactccaagcacctatccttcgaggaagtagtgagtcagtccagc
ccaagtaactgcactgtgtattgtggcggagtgagcacaggactgacagagcaactgatg
agacagaccttctctccctttggacaaatcatggaaatcagagttttcccagacaaaggc
tattcgtttgtgagatttaactctcatgagtcagcagctcatgccattgtgtcagtgaac
ggcacctcaatagagggccatatagtcaaatgctactggggtaaagagaccccggacatg
atgaacccgatgcagcagatgcctctgccccagcagaacaagatgagcttccctgcggca
gcccagccctacggccagtggggccagtggtacggcaacgggccccagatcagccagtat
gtcccgaatgggtggcaggtccccacctacggtgtctacggccagccttggaaccagcag
ggcttcaatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggt
ggggttatggagcctacacagggattgaatgggagtatgctagccaaccagcccggtatg
ggagccgcaggataccccacacactga
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