Cyclopterus lumpus (lumpfish): 117735989
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Entry
117735989 CDS
T09199
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117735989 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117735989 (lsm1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117735989 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
117735989 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117735989
NCBI-ProteinID:
XP_034396831
Ensembl:
ENSCLMG00005001224
LinkDB
All DBs
Position
9:complement(12013920..12016593)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDMDKPCDTVLQQVSIEEILEEQRLQQQAKQETDKVKMQALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtaccagggacagcaagtctcattgacgacatcgacaagaagcacctggtg
ttgctccgagatggcagaacgctgatcggttacctcagaagcattgatcagtttgcgaat
ttagtttttcatcaaacagtggagcgcatccatgtggggaaaaaatttggtgacatccct
cgaggaatattcattgtgagaggagagaatgtggtgctgcttggagagatagatatggat
aagccctgtgacacagtgctgcagcaggtctccattgaagagattctggaggagcaacgg
ttgcagcagcaagccaaacaggaaacggacaaagtcaaaatgcaggccctgaaggaccga
ggcctttccatccccaaagctgataacttggatgaatactaa
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integrated database retrieval system
