Cyclopterus lumpus (lumpfish): 117736018
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Entry
117736018 CDS
T09199
Symbol
ercc6l
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117736018 (ercc6l)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117736018 (ercc6l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
117736018
NCBI-ProteinID:
XP_034396898
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All DBs
Position
9:complement(1114992..1121276)
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AA seq
1216 aa
AA seq
DB search
MDVHHVHGDVAEISKKLNECLSVDADEQVETYRRLIQDGKDVGRQGDMKKALKFFKLAFD
IRQSDRLESRIKKIEEHLAEEDEEEEDDFVDVNGSGLMLFKELYDKLYSYQRDGVAFLYG
LYGRKGGILADDMGLGKTIQVISFLSGMYDAELAKHTLLVMPTSLITNWTKEFAKWTPGM
RVKDFHGTVKERTVNLQKVQRRTGVVLTTYTMLMNNWQQLSSYKGGEFTWDYVILDEAHK
IKNTSTKTAKSTYSIPAKNRVLLTGTPVQNNLKEMWALFDFACRGTLLGTAKTFKTEYEN
PITRAREKDATPGEMALGFRMSENLMATIKPHFLRRTKAEVQNNNTNIAQQEGRAPKLPK
DSGAVMPTLKRKNDLIVWTYLSAVQEDIYRQFISLDHIKELLMTTRSPLAELNIMKKLCD
HPRLFSAAAIAKLGLGEGRAEDQQNDTGSIANVPDDTLIAESGKLVFLFALLERLRDEGH
RTLVFAHYRKVLDIIQRILRNRGFKVMRLDGTITQLAERERLITRFQTDRSYSVFLLTTQ
VGGVGITLTAADRVVIYDPSWNPATDAQAVDRAYRIGQTDNVVIYRLITCGTVEEKIYRR
QVFKDSLIRQNTGDKKNPFRYFSKQELKELFILEDTRSSSTQLQLQALHSRHRRTDPELD
EHIARLHAMEMFGISDHDLMFSLNVDQDEAPEDQEAHHYIEGRVQKAQELMKAESELQMQ
LAESMASGTEAAWLRQPESNYNRERSHKNKHPRASPSFPQSPVVVESDQSGSDQEGVPLN
GSPVIDLTADQSASEDPSVVLEGSREELPERSFMEEEDSAPPEVIEESSVMSDAGDTADV
SVQDLADQSEAEGDDGPAFVTAGEGDFATPLNKRLSVLKLDSGAKPDTSSRLESFEGNFN
LQLEESDLFSDHEVVDPQETEEEERKLLSQLQMDGSFDVYKSLSESRHKRALGLNHASET
DQSMDESIVATKKKRRAVIYDDDDDDDDDGGGGQLNNSFQVLGASTPKSGPAPLRSRKSF
GGNTSVASRRSFIMSMIEDLDPRPTEEEEEEEEEDEDEEEEEASVRHSDEEEIIGSTRDE
LQLEETVGETLNTEEEEEEEEEEEESRQEVISNMEESGQEVISNMEESGQEVEESSTPEL
ASDEKMDQCTAKGIEEEEEEEEEEESFLSLVRRGKQRKSEGKLDEALGFFLRAIDMKPGD
PEVQLMTIQLYRQQRL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccaccacgttcacggcgacgtggcggagatttcaaagaagctgaacgagtgt
ttatctgtggatgcagacgagcaggtggaaacttaccgcagattaattcaagatggtaaa
gacgtcggccgacaaggagacatgaagaaagcgctgaagttcttcaaactggcgttcgac
atccggcagagcgacagacttgagagcaggatcaagaagatcgaggagcatctggccgag
gaggacgaggaggaggaagacgacttcgtcgacgtgaacggcagcggcttgatgcttttc
aaagagctgtacgacaaactttacagctaccagagagacggcgtggccttcctgtacggc
ctctacgggcgcaaaggcggcatcctggcggacgacatgggcctcggcaagaccatccag
gtgatctccttcctctccggcatgtacgacgccgagctggcgaagcacacgctgctggtc
atgcccacctcgctcatcaccaactggaccaaggagttcgccaaatggacccccggcatg
cgggtcaaggacttccacggtaccgtcaaagagaggaccgtgaatttgcaaaaggttcag
cggaggaccggcgtcgtcctgacgacgtacacgatgttaatgaacaactggcagcagctg
tcgtcgtacaaaggcggcgagttcacgtgggactatgtgatcctggacgaggcgcacaag
ataaaaaacacgtccaccaaaacggcaaaaagtacctactccataccggcaaagaaccgg
gttctcctcacgggcacgccggtccagaacaacctgaaagagatgtgggctctgtttgat
tttgcgtgccgcggcaccctcctgggaacggcaaagaccttcaagaccgagtatgagaac
cccatcacccgggccagagagaaggacgccaccccgggggaaatggccctcgggttccgg
atgtccgagaacctcatggccacaataaagccacacttcctccgcagaaccaaagcggaa
gtgcagaacaataacacaaacatcgcacaacaggaaggccgagccccaaaactcccgaag
gactccggagccgtcatgccgacgctgaagaggaaaaacgacctgatcgtctggacttac
ctgagcgccgtccaggaggacatataccggcagttcatttctctggaccacatcaaggag
ctgctcatgaccaccagatcgcctctggccgaactcaacatcatgaagaagctgtgcgac
cacccgaggctgttctccgccgcggccatcgccaagctgggcttgggggaaggtcgagct
gaggatcagcagaatgacaccgggagcatcgccaacgtgcccgacgacaccttgatagcc
gagtccgggaagctggtctttctgtttgctcttctggagcggctcagagacgaaggccac
cgcacgctggtcttcgctcactacaggaaggtgctcgacatcatccagcgcatcctcagg
aaccgaggcttcaaggtgatgagactggacgggaccatcactcagctggcggagcgagaa
cggctcatcacccggttccagacggacagaagctactccgtcttcctcctcaccacccag
gtcggaggggtcgggatcaccttgacggcggccgaccgagtcgtgatctacgatcccagc
tggaacccggcgacggacgcccaggcggtggaccgggcgtaccggatcggccagaccgac
aacgtggtcatctaccggctgatcacctgtggcacggtggaggagaagatctacagacgg
caggtcttcaaagattccctcatcaggcagaacaccggggacaagaagaacccgttccgg
tacttcagcaagcaggagctgaaggagctcttcatcctggaggacacgaggtcttcgtcc
acgcagctgcagctccaagctctgcactccagacaccggcggacggaccccgaactggat
gagcacatcgcccgcctccacgccatggagatgttcgggatctcagaccacgacctcatg
ttctccctcaatgtcgaccaggatgaggcgccggaggaccaggaggcgcaccactacatc
gagggccgggtccagaaggcccaggagctgatgaaggctgagtcggagctgcagatgcag
ctcgcggagagcatggcgtccggcacagaagcggcttggctccgacaaccggagtccaac
tacaaccgggagcgttctcacaagaataaacatccgagagccagtccttcctttccacag
tcaccggtggtggtggagtcggaccagtccggttctgaccaggagggcgtcccactgaac
gggagcccagttattgatctcactgccgatcagagcgcgtcagaagatccgtccgttgtt
ctggaaggaagccgagaggagcttccggagcggagtttcatggaggaggaggactccgcc
cctccggaggtgatcgaggagtcttcggtgatgtcggatgccggggacacggcggacgtc
tccgttcaggacctggcggaccagtctgaggccgagggagacgacggcccggccttcgtc
acggcgggcgagggagacttcgccaccccgctgaacaagcggctctcggtcttgaagctc
gactcaggcgccaaacccgacacgtcatcgagactcgagtccttcgagggcaacttcaat
ctgcagctggaggaaagcgacttgttctcggaccacgaggtggtggatccccaggagacc
gaggaggaggagaggaagctgctgtctcagctgcagatggacggaagctttgacgtttac
aaatctctttctgagagtcgacacaaacgagctctcggcctcaatcacgcctctgaaacg
gaccaatccatggacgagtccatcgtggccaccaagaagaaaaggagagctgtgatttat
gacgacgacgacgacgacgacgatgacggtggtgggggtcaactcaacaactccttccag
gttcttggagcctccacgccaaaatccggccccgcccctctacggtcaagaaagagcttt
ggcggaaacacctcggtggcctcacgccgctccttcattatgtccatgattgaagacctc
gacccccgaccgacggaggaggaggaagaggaggaggaggaggacgaggacgaggaggag
gaggaggcttctgtgaggcactcggacgaagaggaaatcattggttcaactcgtgatgag
cttcagctggaggagacagtgggagagacattaaacacagaagaagaagaagaagaggag
gaggaggaggaggagtctagacaggaagtgatcagcaacatggaggagtctggacaggaa
gtgatcagcaacatggaggagtctggacaggaagtggaggagtccagcacgccggagctc
gcctccgacgagaagatggatcagtgcaccgcgaagggcatcgaggaggaggaggaggag
gaggaggaggaggagagcttcctctcgctggtcagaagggggaagcagaggaagagcgaa
gggaagctggacgaggccttgggcttcttcctgagagccatcgacatgaagcccggagac
cctgaagtccagctcatgaccatccagctgtaccggcagcagagactgtaa
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