KEGG   Cyclopterus lumpus (lumpfish): 117736029
Entry
117736029         CDS       T09199                                 
Symbol
snx2
Name
(RefSeq) sorting nexin-2
  KO
K17917  sorting nexin-1/2
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117736029 (snx2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117736029 (snx2)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:clum04990]
    117736029 (snx2)
Membrane trafficking [BR:clum04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    117736029 (snx2)
Domain-containing proteins not elsewhere classified [BR:clum04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   117736029 (snx2)
SSDB
Motif
Pfam: Vps5 PX BAR_3_WASP_bdg DUF3557 HR1 FAM92
Other DBs
NCBI-GeneID: 117736029
NCBI-ProteinID: XP_034396926
Ensembl: ENSCLMG00005004349
LinkDB
Position
9:1561770..1594299
AA seq 544 aa
MTALGKPPDSPPQLSLCQSAVRQCVCVCVSVSYPPSSQSTMADTARDPPPELSDFQELQD
GEDLFPEPSAPLESGPASLPAEDISTNSNGPKQDSLFDDDPEDLFAEATEEVSLDSPERD
VLLSDGPSPAITPITPPCSLITPHIDMFTHCSFDEIEEEEGGDSFDMHISVSDPEKVGDG
MNAYMAYKVSTKTSMSLFRSQDFSVKRRFSDFLGLHSKLASKYLHIGYIVPPAPEKSIVG
MTKVKVGKEDQSSNEFVEKRRSALERYLMRTVKHPTLLKDPDVLQFLESSELPRAVSTQA
LSSAGILRMVNKAAEAVNKMTIKMNESDAWFEEKQQHFDNLDLQLRKLHASVESLVCHRR
ELSVNTALFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQDQANADFYCFSELLGD
YVRLITAVKGVFDHRMKTWQKWQDGQILLQKKREAEAKLQFNNKPEKLQQAKDEMRELEG
KVQQGERDFELISKTIRKEVSRFEKERVKDFKTIIIKYLESLVQTQQKLIKYWDAFLPEA
KAIS
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgacagcgctgggaaaacctcccgactcccccccccagctctcgctctgtcagtcggct
gtccgtcagtgtgtgtgtgtgtgtgtgtcagtcagttaccccccgtcgtcacaatcaacc
atggcggacacggcacgcgaccctccgccggagctctccgacttccaggagctgcaggac
ggggaggacctgttcccggagccgagcgcccccctggagtcaggaccagccagtctacct
gctgaagacatcagcaccaactcaaatggacccaaacaggattcattgtttgatgacgac
ccagaagatctgtttgcagaggccacagaggaggtctcgttggacagtccagagagagac
gtcctgctgtccgacggcccgtcgcccgccatcacccccatcacaccgccctgctccctc
atcacgcctcacatcgacatgttcacacactgctccttcgacgagattgaagaagaggag
ggcggtgactccttcgacatgcacatatcagtgtctgaccccgagaaagtgggtgacggg
atgaatgcctacatggcctacaaagtgtccaccaagacctccatgtctctgttcaggagt
caggacttttcagtgaaacggcgtttcagtgactttctgggtctgcacagcaaactggcc
tccaagtatctccacatcggctacatcgtccccccggcgccggagaaaagcattgtgggg
atgaccaaggtgaaggtggggaaggaggaccagtcctccaacgagttcgtggagaagagg
aggtcggctctggagaggtacctgatgaggaccgtgaagcaccccacgttgctgaaggac
cccgacgtgctgcagttcctggagagctccgagctgccgcgggccgtcagcactcaggct
ctgagcagcgctggaatcctccggatggtcaacaaggcggcggaggccgtcaacaagatg
accatcaagatgaacgagtcagacgcttggttcgaggagaagcagcagcactttgacaac
ctggaccttcagctgaggaagcttcacgccagcgttgagtccctggtctgtcaccggaga
gagctgtcggtgaacacggcgctgttcgccaagtcggcggccatgttggggaacagcgag
gaccacacggctctgtcccgggccctgtcccagctggccgaggtggaggagaagatcgac
cagctgcaccaggaccaggccaacgcggacttctactgcttctcagagctgctgggggac
tacgtccgcctcatcaccgccgtcaagggggtgtttgaccacaggatgaagacctggcag
aagtggcaggacggtcagattctgctgcagaagaaacgagaagctgaagctaaacttcag
ttcaacaacaagccggagaaactgcagcaggcgaaggacgagatgagagagctggagggg
aaagtccaacagggagagagggactttgaactcatctccaaaaccatccgcaaggaagtc
agccggtttgagaaagaacgagtgaaggacttcaaaacgattatcatcaaatacctggag
tctctggttcagacgcagcagaagctgatcaaatactgggacgccttcttacccgaggcc
aaggccatctcgtag

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