Cyclopterus lumpus (lumpfish): 117736029
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Entry
117736029 CDS
T09199
Symbol
snx2
Name
(RefSeq) sorting nexin-2
KO
K17917
sorting nexin-1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117736029 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117736029 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117736029 (snx2)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117736029 (snx2)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117736029 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR_3_WASP_bdg
DUF3557
HR1
FAM92
Motif
Other DBs
NCBI-GeneID:
117736029
NCBI-ProteinID:
XP_034396926
Ensembl:
ENSCLMG00005004349
LinkDB
All DBs
Position
9:1561770..1594299
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AA seq
544 aa
AA seq
DB search
MTALGKPPDSPPQLSLCQSAVRQCVCVCVSVSYPPSSQSTMADTARDPPPELSDFQELQD
GEDLFPEPSAPLESGPASLPAEDISTNSNGPKQDSLFDDDPEDLFAEATEEVSLDSPERD
VLLSDGPSPAITPITPPCSLITPHIDMFTHCSFDEIEEEEGGDSFDMHISVSDPEKVGDG
MNAYMAYKVSTKTSMSLFRSQDFSVKRRFSDFLGLHSKLASKYLHIGYIVPPAPEKSIVG
MTKVKVGKEDQSSNEFVEKRRSALERYLMRTVKHPTLLKDPDVLQFLESSELPRAVSTQA
LSSAGILRMVNKAAEAVNKMTIKMNESDAWFEEKQQHFDNLDLQLRKLHASVESLVCHRR
ELSVNTALFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQDQANADFYCFSELLGD
YVRLITAVKGVFDHRMKTWQKWQDGQILLQKKREAEAKLQFNNKPEKLQQAKDEMRELEG
KVQQGERDFELISKTIRKEVSRFEKERVKDFKTIIIKYLESLVQTQQKLIKYWDAFLPEA
KAIS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgctgggaaaacctcccgactcccccccccagctctcgctctgtcagtcggct
gtccgtcagtgtgtgtgtgtgtgtgtgtcagtcagttaccccccgtcgtcacaatcaacc
atggcggacacggcacgcgaccctccgccggagctctccgacttccaggagctgcaggac
ggggaggacctgttcccggagccgagcgcccccctggagtcaggaccagccagtctacct
gctgaagacatcagcaccaactcaaatggacccaaacaggattcattgtttgatgacgac
ccagaagatctgtttgcagaggccacagaggaggtctcgttggacagtccagagagagac
gtcctgctgtccgacggcccgtcgcccgccatcacccccatcacaccgccctgctccctc
atcacgcctcacatcgacatgttcacacactgctccttcgacgagattgaagaagaggag
ggcggtgactccttcgacatgcacatatcagtgtctgaccccgagaaagtgggtgacggg
atgaatgcctacatggcctacaaagtgtccaccaagacctccatgtctctgttcaggagt
caggacttttcagtgaaacggcgtttcagtgactttctgggtctgcacagcaaactggcc
tccaagtatctccacatcggctacatcgtccccccggcgccggagaaaagcattgtgggg
atgaccaaggtgaaggtggggaaggaggaccagtcctccaacgagttcgtggagaagagg
aggtcggctctggagaggtacctgatgaggaccgtgaagcaccccacgttgctgaaggac
cccgacgtgctgcagttcctggagagctccgagctgccgcgggccgtcagcactcaggct
ctgagcagcgctggaatcctccggatggtcaacaaggcggcggaggccgtcaacaagatg
accatcaagatgaacgagtcagacgcttggttcgaggagaagcagcagcactttgacaac
ctggaccttcagctgaggaagcttcacgccagcgttgagtccctggtctgtcaccggaga
gagctgtcggtgaacacggcgctgttcgccaagtcggcggccatgttggggaacagcgag
gaccacacggctctgtcccgggccctgtcccagctggccgaggtggaggagaagatcgac
cagctgcaccaggaccaggccaacgcggacttctactgcttctcagagctgctgggggac
tacgtccgcctcatcaccgccgtcaagggggtgtttgaccacaggatgaagacctggcag
aagtggcaggacggtcagattctgctgcagaagaaacgagaagctgaagctaaacttcag
ttcaacaacaagccggagaaactgcagcaggcgaaggacgagatgagagagctggagggg
aaagtccaacagggagagagggactttgaactcatctccaaaaccatccgcaaggaagtc
agccggtttgagaaagaacgagtgaaggacttcaaaacgattatcatcaaatacctggag
tctctggttcagacgcagcagaagctgatcaaatactgggacgccttcttacccgaggcc
aaggccatctcgtag
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