Cyclopterus lumpus (lumpfish): 117736059
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Entry
117736059 CDS
T09199
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117736059
03041 Spliceosome [BR:
clum03041
]
117736059
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117736059
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117736059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Secretin_N
FUBP_C
Motif
Other DBs
NCBI-GeneID:
117736059
NCBI-ProteinID:
XP_034396961
Ensembl:
ENSCLMG00005006056
LinkDB
All DBs
Position
9:872777..907061
Genome browser
AA seq
546 aa
AA seq
DB search
MAELQGQASLGQPGLKADGLADVLQRARQMVGKMGGDAMSHLNSSSGSIEPSLYYPGQKR
PGEDGVGNQLAAMGHQSRVITEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSG
GLMERPCSLTGTPESIEQAKRLLIQIVDRCRNGPGFHGDGEGGASVQEMLIPASKVGLVI
GRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRISGDPYKVQAARELVLEVIREKDGD
FRSGRNDFSARLGGASLDSVSLQVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKADDG
ISPERVAMVMGQPDRCQHAVHLINELIQTAQERDGFGSALRSGRVRGRGDWTMGSPGPLQ
EVTYTIPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFTIRGTAQQMD
LARQLIDDKIGGSGIMSNGGFGFSPFTQGPAAHQNCGSGQTFLTGVWGNTYQTSWQNPGQ
QDPGQQNQPQSLMADYSKAWEDYYKKQSQSSQQSSVPDYTAALAEYYRQQQPYLWNAAQI
QNEEEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgcagggacaggcctcgctggggcagccggggctgaaggcagacgggctg
gccgacgttctccagagggcccgccagatggtgggtaagatgggcggagacgccatgtct
cacctcaacagctcctcaggaagcattgagccctcgctgtactaccctggacagaaacga
ccaggagaagacggagtaggtaaccagctagcagccatggggcatcaaagcagggtaatc
acagaggattacaaggtccccgacaggatggtcggcttcattattggaagaggaggggag
cagatcaccaggatccagttggagtccggctgcaagatccagattgctgccgacagcgga
ggtctgatggagcggccatgttccctgactggaactccagagagcatcgagcaggcgaag
cgtctcctgatccagatcgtggatcgctgcagaaacggtccgggttttcacggcgacggt
gaaggcggagcctccgtgcaggagatgctgatccctgccagcaaggtggggctggtgatt
ggccgaggaggagacaccatcaaacagctgcaggagcgtgcgggggtgaagatgatgatg
atccaggacggtccgatgcccacgggagccgacaaacctctccgcatctccggagacccg
tacaaagtgcaggcagcgagggagttggtgctggaggtgatccgggagaaggacggagac
ttcaggtcgggacgcaacgacttcagcgctcgtctgggaggagccagcctggactccgtc
tctctgcaggttccagttcccaggtttgctgtcggcatcgtgatcggcaggaacggagaa
atgatcaagaagatccagaacgacgccggagtccggatccagttcaaagcagatgacggc
atcagtccagagcgcgttgccatggtgatgggtcagccagaccgctgtcagcatgctgtt
cacctcatcaacgagctcatccagaccgcacaggagcgtgatggtttcggctcggccctg
cggagcggcagggtcagaggtcgtggtgattggaccatgggctcccccggcccgctacag
gaagtgacctacaccatcccggctgacaagtgcggcctggtcatcggcaaaggaggagaa
accatcaagagcatcaaccagcagtccggggcccacgtggagctccagaggaaccccccc
ccctccaccgaccccaacactcgggtcttcaccatccggggtaccgcccagcagatggac
ctggcccgccagctcatagacgacaagatcgggggttcggggatcatgagtaacggaggt
tttggattcagtcctttcactcagggacctgctgcccaccagaactgtggcagcggtcag
accttcctcactggcgtttggggaaacacctaccagaccagctggcagaaccctggacaa
caagaccccggtcaacagaaccaacctcagagcctgatggccgactacagtaaggcctgg
gaggactactacaagaagcagagtcagtcgtctcagcagagttcagttccagactacact
gcagcgttagcagaatactacagacagcagcagccctacctgtggaatgccgcccagata
cagaacgaggaagagcaatga
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