KEGG   Cyclopterus lumpus (lumpfish): 117736062
Entry
117736062         CDS       T09199                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117736062
   03400 DNA repair and recombination proteins [BR:clum03400]
    117736062
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117736062
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117736062
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 117736062
NCBI-ProteinID: XP_034396980
Ensembl: ENSCLMG00005007476
UniProt: A0A8C2X5X4
LinkDB
Position
9:17321649..17337758
AA seq 1157 aa
MMTSVVSNQARGARDGTLSTTTQTTQPQATAEQILLAQMFYDKNDADFEDKVKQLIEVTG
KTQDECMVALHDCNEDVNRAINFLLESTPDTTSWETVGKKRSLGKEGGPSEIKESREKKG
EREASRGRGASNRRGRGISRGREGRLEENGFEVAPGERGGDRGGRGRGRGAVVRGRGRAA
AGNRFSSQGMGIFNPADYTANSRARQDTWAGNETAEGTGTWEGNVEDWAAEDWNEDLSET
KVFTASSPPANLIKHGPNSDQASLLPKTGVAVGGSIDLGAIVDGPSAEHLGQSLVFTNSQ
HNGRTATHSYAHATANSYAHAASASTTYAHAALSSVLGSGFGSLNAPKPTPASEIRTSEQ
LNGPRLGQRASQMLANASNVSISKDAGPPLVQNPVPACSPSLEVKAQRVENGPVTAQHME
MKLQPEPSAVLSQLAQRQQQSSILLHAPQVPTPPGHESSVPHLRDQASPGGKLTCMEHSV
TEPPQRQLKTQRRRVPPSSKIPSSAVEMPGSADIRGLNVQFGGLDFGSEAGSGTINMAQT
EPVREQAPTQVPAPAASAPMPVPTGVTTQQQQSSLFSNPGSVSEHMSSLPTLPLAVSDPN
FPSPSLGLPSATPSPSMGLPSAAAPPSSTAPSATSRVESSGSRSLPPHLGFSQTKDVSSA
AALTNGYSGIKTQSTQDTTSSTSRTVKTESPVMTTDTGHHIHSPAVTPSHSTSIPSLSSH
VTSTHSTGSALATSSSLTISNVEHNSIGNLHAFSSSPSQAVDSCPPLAVSNSIANGLHPS
GAPGLTSNGTNVTLSAAGSRTAPLLTTSGKAPPNLSQGVPPLLANQYIMGPGGLLPAYPQ
IYGYEDLQMLQSRLPMDYYGIPFPGTTPTMPGRESLANNPYSGEATKFGRNDSSSPAPPT
SMSTAGVQSQPQQAPQAGTQGQGQGQQTQNQAFLNPPLPPGYGYTGLPYYAGVPGVPSAF
QYGPTVFVPPAAAKQPAMGLANPSNQYHQQHQPNYGQHAYGTAFDDLSQAHGGEYSKGGY
GGSVQSQAKSAGSGPGKAPGLSGSGTGGGVPDMGGSIYSKTQSFDKQGFHTGTPPPFSLP
SALGGTGPLNPGGAPGYAPAPFLHILPPHQQPHSQLLHHHLTQDGQGGPGQRNQSSSMQQ
KTQGSKSSYGSSPYWAN
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgatgacttcagtggtcagcaatcaagcccggggggctcgggacggaacgctgtccaca
actacacaaacaacacagccacaggccacagcagaacagattcttttagcccaaatgttc
tacgacaaaaatgatgctgactttgaagacaaagtcaaacagctgattgaggtaactggg
aaaactcaagatgagtgcatggtagccctccatgactgcaacgaagatgtaaacagagcc
atcaattttctgctggagagcacccctgatacaacctcctgggaaactgtggggaagaag
cgtagccttgggaaagaaggaggaccctcagagataaaggagagcagggagaagaaagga
gagagggaggctagtcgcggacgtggggcgtccaacagaaggggcagaggcatcagccga
gggcgcgaaggtcggttagaggagaatgggtttgaggtggctcctggagagagaggggga
gaccgtggaggcagagggcggggcagaggggctgtggttcgtggtagaggaagggcagct
gctggcaacaggttctcttcccagggaatgggcatcttcaatccggctgactacacagct
aactcccgagctcgccaggatacatgggcaggcaatgaaactgctgagggaactggaaca
tgggaaggcaatgtggaagactgggctgcagaggactggaatgaggacttgtctgagacc
aaagtattcactgcctcctctcctccagcaaacctcatcaaacatggacccaattcggac
caggctagcctactgccgaagactggagtggctgtagggggttctatcgacttgggagcg
atagtcgatggtccctcagctgagcatttgggccaaagcctggtgtttaccaattcccaa
cacaatggacgcactgcaacacacagctacgcacacgccacagccaacagctacgcccat
gccgcctctgctagtacaacctatgcacatgctgcactgtcctcagtcctgggttctggt
tttgggtccctgaatgcgcctaagccaacgcctgcctccgaaatcaggacatcagagcag
ctcaatggccctcggcttggtcagagagccagtcagatgttggccaacgccagcaacgtt
agcatttccaaagatgcagggccacctctagtacagaaccctgttcctgcatgttctccc
tctctagaagtcaaggctcagagagtggagaatggccctgttactgcccaacacatggag
atgaagcttcaaccagagccatcagcagtgctcagccagctggctcagaggcaacaacag
tcctccatccttctgcatgcaccacaggtccccacaccaccaggtcacgagtcctccgtg
cctcatttgagagatcaagcttctccaggagggaagttgacatgtatggagcattctgtc
acagaaccccctcagcggcagctaaagactcagagacgcagagtacctccttcctcaaag
atcccgtcgtcagcagtggagatgccgggctctgcagatatacgtggcctgaatgttcag
tttgggggtcttgactttgggtctgaggctggtagtggaacgataaacatggcacagacg
gagccggtcagggaacaggccccgactcaggtcccagctccagcagcttctgcacccatg
cctgttcctactggtgttactacacagcagcaacagagcagcctgttctccaatccagga
tctgtgagcgaacacatgagcagcttacccaccttaccattagctgtatcggatcccaac
ttcccctcaccatccttgggcttacccagtgccacgccctctccctccatgggtcttccc
agtgcagccgcacccccctcttctacagccccatccgcaaccagccgtgtggagagcagt
ggctcaaggtccctgccacctcatctgggcttctctcagaccaaagatgtctcctcagct
gctgctctcacaaatggctacagtggcataaagacacagagcacacaggacactacgtca
tcaacgtctagaacagtcaaaactgagtctcccgttatgacgactgacactggccaccac
atccactcccctgcagtcacaccttcccactcaacatccatcccctcgctcagcagtcac
gtgaccagtactcactcaacgggatctgctcttgccacaagctcctccctcacgataagt
aatgtggagcacaatagtattggcaacctccatgccttttcatcgtcgcccagccaagct
gtcgattcgtgtcctcccctggctgttagcaactcaatcgccaatggtctgcacccatct
ggagcacctggactaacttctaatggcacaaatgtcacactctcagctgcaggcagccgc
acggcacccctgctcaccacttctggtaaagctcctcccaacttgtcccaaggagtgcca
cctctcctggcaaaccagtacatcatgggccctggtggcttgctccctgcttacccccag
atctatggatatgaggacttgcaaatgctgcagtctcgccttcctatggattattatggt
ataccattccctggcactacacctactatgcctggaagagagagcctggctaataatcca
tattctggtgaagcgacaaagtttggcaggaatgattcgtcatctccagctcccccaaca
agcatgtctacggccggggtgcagtcccagccacagcaggcaccacaggcaggaacacaa
gggcagggccagggtcagcaaacacagaaccaggccttcctcaatccccctctgccccca
ggctacggatacactggtctgccgtactacgccggtgtaccgggtgttccctctgctttc
cagtacggccccacagtctttgtgcctcctgctgcggctaaacaacctgcaatgggactg
gctaacccttccaatcagtatcaccaacagcatcagcccaattacggacagcatgcatat
ggcacagcctttgatgacctgtctcaagcccacggtggggagtacagtaagggagggtac
ggaggctctgtccagtcacaggccaagtcagcgggcagcggcccagggaaagcaccagga
ctgtcggggtcaggtaccggtggaggagtacctgacatgggaggctcaatctacagcaaa
actcaatcatttgataagcagggcttccacacggggacaccacctcccttcagtctgcct
tcggcactggggggaacggggcccctgaaccccgggggtgctcctggctatgcccctgct
cccttcctgcacatcctgccaccgcaccaacagccccactctcagctgctgcaccatcac
ctcacacaggacggacagggtggtcctggtcagcgcaatcagtccagcagcatgcagcag
aagacccaaggcagcaagtccagctatggcagctccccctactgggccaactga

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