Cyclopterus lumpus (lumpfish): 117736114
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Entry
117736114 CDS
T09199
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1 isoform X1
KO
K13129
survival motor neuron protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117736114 (smn1)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117736114 (smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
BUD22
TUDOR
DNA_PPF
Motif
Other DBs
NCBI-GeneID:
117736114
NCBI-ProteinID:
XP_034397088
Ensembl:
ENSCLMG00005021338
LinkDB
All DBs
Position
9:complement(15682482..15686876)
Genome browser
AA seq
282 aa
AA seq
DB search
MANGCKDVLFSRGGGQSDDSDIWDDTALIKAYDKAVTSFKTALKGEEAPEASKKNLPGKK
RKNNKKNQSRKRTNAAADKEWQVGDPCSAYWSEDGQLYAATISFIDEKRSTCIVVYTEYG
NEEEQNLEDLLSEISEADEETNTKVEAESSTEESDRSTTPNHHKQQPHSKPQKSKAHKEP
PPMRAPGFPGFPPGPPPMHAFRRGGSRRSGGHGPVPPPWPPMMPFGPPMIPPPPPMSPDM
VDDEALGSVLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggatgcaaagacgtgttgttttcacgtggaggtggacagagtgacgattca
gatatatgggatgacacagcattgataaaggcatatgacaaggctgttacatcgttcaag
actgcccttaagggcgaagaggcgccggaggcctccaagaaaaacctgccaggaaaaaaa
cgcaagaacaacaaaaagaaccaaagcaggaaaagaacgaatgcagccgcagataaagag
tggcaggttggggacccgtgcagtgcgtactggtcagaggatggccagctctatgcagcc
actatctccttcatagacgagaagagaagcacttgtatcgttgtttacacagaatacggc
aacgaggaggagcagaaccttgaagacttactttcagagatctctgaggctgatgaagaa
acaaataccaaggtagaggcagaatcatcaacagaggaaagtgacaggtcaaccacacca
aaccatcacaaacaacagccacacagtaaaccccagaagtccaaggcccataaagaaccc
cctcctatgcgggctcctggtttccctgggtttcctccaggtcctcctcccatgcatgct
ttccgacggggaggaagccgacgatctggtggtcacggtcctgtacctcctccctggcct
cccatgatgccttttggtccaccaatgatccctccacctccgcctatgagccctgacatg
gtggatgatgaagctttgggcagcgtgctcatctcctggtacatgagtggatatcacacg
ggatactacttggggttgaaacaaggacgcaaagaagctgccaattggacgaaactgcac
cacaaatga
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