KEGG   Cyclopterus lumpus (lumpfish): 117736116
Entry
117736116         CDS       T09199                                 
Name
(RefSeq) transducin-like enhancer protein 4
  KO
K04497  groucho
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04310  Wnt signaling pathway
clum04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117736116
   04330 Notch signaling pathway
    117736116
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117736116
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    ADF / Cofilin
     SCMC complex
      117736116
SSDB
Motif
Pfam: TLE_N Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 CFAP251_N Beta-prop_EML WDR90_beta-prop_4th Beta-prop_IFT140_1st NBCH_WD40 DSE1_N Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_Nup120_160 ASA1 Beta-prop_NOL10_N Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_ACSF4 PAC11 Beta-prop_WDR41 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_IP5PC_F HALZ
Other DBs
NCBI-GeneID: 117736116
NCBI-ProteinID: XP_034397094
LinkDB
Position
9:complement(23646972..23680089)
AA seq 770 aa
MIRDLSKMYPPARHPPGQQLKFTVTESCDRIKEEFHFLQAQYHSLKLECEKLASDKTEMQ
RHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQVTMAE
LNAIIGQQLHAQHLSHGHAIPVPLTPHPAGLQPPLHAGAGTTASLLALSSALSHQLPVSL
KDERKHHDNSGEHPRDRDSVKSSSVSPSASFRNREKHRSSSDYSSDSKKQKTDGKELAST
RYESEGEKSDDNLVVDVSNEDPASPRGSPAHSPRENGLDKSRLAKKDAPLSPSSVASSSS
TPSSKSKEINLNEKSTTPVSKSSTPTSRSDAPTPSSTSTPGPRSAPGKPPGVEALAPGLR
TPLAVPCPYPSPFGLVPHPGMNGELSGAGAAYTGLHNISPQMSVVAAAAVAAYGRTQVVG
FDPHHHIRVPGLPPNLSGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQINT
LNHGDVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKTPVSQLDCLNRDNYIRSCRLLP
DGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV
WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI
FSLGYCPTGEWLAVGMENNNVEVLHVTKPDKYQLHLHESCVLSLRFAHCGKWFVSTGKDN
LLNAWRTPYGASIFQSKESSSVLSCDISIDDKYIVTGSGDKKATVYEVNY
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgattcgagatctgagcaagatgtaccccccggcgcggcatccgccgggacagcagcta
aagttcactgtcactgagtcctgcgaccggatcaaggaggagttccacttcctgcaagcc
cagtatcacagtctgaaattggagtgtgagaaactggccagtgacaaaaccgagatgcag
agacactatgtcatgtactatgaaatgtcatacggactcaacatagagatgcacaagcag
gcggagatcgtcaagcggctgaacgcaatctgcgcccaagtcatccccttcctctctcag
gagcatcagcagcaggtggtgcaggcggtggagcgcgccaagcaggtcaccatggctgaa
ctcaacgccatcataggacagcagctccatgctcagcacctctcccacggccacgccatc
cccgtcccgctcacaccgcacccggcgggcctccagccacccctgcacgccggggccggc
accaccgccagcctgctggctctgtcctccgccctcagccaccagctgccggtctcgctg
aaagacgagaggaagcaccacgacaacagcggcgaacacccgagagacagagactcggtc
aagagctcatccgtgtctccctcggccagttttcggaaccgcgagaagcacaggagttcg
agcgattactcctccgacagcaagaagcagaagacggatgggaaggagttggcctccacg
cgctatgaaagtgaaggagagaagagcgacgacaacttggtggtggacgtctccaacgag
gatccagcgtctcccagaggaagtcctgcccactcgccacgggagaacgggttggacaag
agtcgcctggcgaagaaggacgctccgctgagtccgtcctccgtcgcctcctccagcagc
acgccttcttccaaatccaaagagattaatttgaatgagaagtccaccacacccgtgtcc
aagtccagcaccccgacctcccgctccgacgccccgacgccgagcagcacctccaccccg
ggcccgaggtccgcgccgggcaaacccccgggagtcgaggcactggctcctggtctccgt
acgccgctggcggtgccctgcccgtaccccagtccgtttggattggttccccacccggga
atgaacggagagctgagcggagccggggccgcctacaccggcctgcacaacatttctcct
cagatgagcgtggtggccgccgccgcagtggctgcttacggacgcacacaagtggtggga
tttgatcctcaccaccacatacgtgtccctggccttccccccaacctgtcaggcattccc
ggtggaaaaccggcctactccttccacgtgagtgccgacggacagatgcagcccgtgcct
ttccccccggacgcactcatcggccctggcatcccgcgtcacgcgcgccagatcaacacc
ctgaaccacggggacgtggtgtgcgcagtcaccatcagcaacccaacgcgccacgtctac
accggaggcaagggctgcgtcaaggtgtgggatatcagtcacccggggaacaagaccccc
gtatcccagctggactgcctcaacagagacaactacatccgctcctgtcggctgcttccc
gacgggcggactctcatcgtcgggggcgaggcgagcactctatcgatctgggacttggcc
acgccgaccccgcggatcaaggccgagctgacttcgtccgcacccgcatgctacgctctg
gccatcagcccagactccaaggtctgcttctcctgctgctccgacggaaacatagccgtg
tgggatctacacaaccagacgctggtcaggcagttccagggccacaccgacggagccagc
tgcatagacatctccaacgatgggaccaagctgtggactggaggcctggacaacacagtg
cggtcctgggacctcagggagggacggcagctgcagcagcacgatttcacctcccagatc
ttctcactgggctactgtccaacgggcgagtggctggcagtcgggatggagaacaataac
gtggaggtcctgcacgtcaccaaacctgacaagtatcagctccacctgcatgagagctgt
gtgctctccctcagatttgctcactgtggtaagtggtttgtgagcacgggaaaagacaat
ctgctcaacgcatggagaaccccgtatggagccagcatattccagtcgaaggagtcgtcc
tccgtgctgagctgcgacatctccatagacgacaagtacattgtgacgggctccggagat
aagaaggcgaccgtctacgaggtcaactactaa

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