Cyclopterus lumpus (lumpfish): 117736127
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Entry
117736127 CDS
T09199
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117736127 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117736127 (rab11fip1a)
Membrane trafficking [BR:
clum04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117736127 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF7783
Motif
Other DBs
NCBI-GeneID:
117736127
NCBI-ProteinID:
XP_034397113
Ensembl:
ENSCLMG00005009047
LinkDB
All DBs
Position
9:13087208..13101003
Genome browser
AA seq
1246 aa
AA seq
DB search
MSLADQSQQWFPTSVQVTVHQARNLRAKGKHGTNDAYAIIQVAKDKFSTSVSEKCVDPVW
KEEASFDLPLFHPGNGDRCTLYVTAMHRAQVGLDKFLGQAVVNLLDLHDNTPRKKTDWFK
LVDKSGKEDKARGEFLLDIQFMRNNMSASMLDLSMQDKPRSRISKLKDKVRGKKRDGFSD
SASAIVPSVSKVLTDSEGEVDTQSLNQSEGVKKKSKLKSLFAPKSNLHRNISQSMSTLGT
LPEKNSSISGSRSSGLNVDSPDVKKKFKFLGHKRTGSSDSKHSLGAFSLLGRSKQSNSDL
NNLCINGSHVYAEETDPQSGSTLSLNSSGQGSVEDIRKHTSEVSVDTFISVPVPSFKHES
TDKAILEQQRHQEEEERRQAEERHTAEAKRVEEEKYRVEAKRMQEEEEHGQQEEQERKRH
FLEDEARRKKQREEEEEERRKQEEAAECQKLEEERRRSDDLKRQEEASMSDRLSSLFGMI
RKKEEKKEELPITAPFSNSGDPDKLSSHPSANPFEVIDIGIDNERPVDHQKSSGNPQTPS
AMLFLNRTAKVSAVKPRYTQSLESEPAECQTPSQLCPSPATSESNLPSVPFDSPDTFSSF
RSSLALPNISQSPSGSPRGSIEDLSTGFVESSLMAEKKRRAPEAPLYITHGDKTGGNTAP
FREITNPAYVEKDNPEPGRKMSLPLPDYNTLFPDKRHGVQGHTRWDHIIAEVNQKHRDFA
EMSVDDPEENEPTFSLPQESPAMQLLKHYQTQSQQTKPVSIKKAAAPVPPKPVAPPGPRS
VTDSSQTQSQNTASQSLMRPNLPTVSEPVNTRRESLSEFSRFGARRALRPSPGATHAPRS
ASQMDLKTTTPDDEREVQATVNIEAPTAQPRQRARGKETVQQEDSALTPVVSDKYMNSTI
QTLPSSGMSSMVTKGRQAELDPFPSTELLSKDPWAQLKPNQEVDPFSTGSVQKEQTVEDR
GMTPDDLDNIFSQEKQTDFVADFYGSESNKHTEYVKKDSQNQVSPVFHGGNSQRQKQSIP
FTTHSDNKTSRSQQKPVHKEETTITTANQVYSAKSVRNGSITQKPSDDARTHRVFHGRED
QFGAEPLRSTLTSSEPLKLDVEEVEPASPAGGLSVGKASLPALVSPSDVQPVSAQNSNGG
GLALTPRRPHPVKPMSSESQHPISTTAVKEKKVRKSSPGKVQVANSVDSGPFTQLTQEEL
ITMVVRQQADLSKKDSQIVELEEYIDNLLVRVIDEQPGILQFDKPA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgaccagagccagcagtggttccctacgagtgtccaggtaacggtccat
caggctcggaacctgcgtgccaaggggaaacatggcaccaacgacgcctacgccatcatc
caggtggccaaagacaagttttcgacctccgtctctgagaaatgtgtcgatccggtgtgg
aaagaagaggcgtcgttcgacctgccgctcttccacccgggcaacggcgaccgctgcacg
ctgtacgtcaccgcaatgcaccgggctcaggtggggctcgacaagttcttgggtcaagct
gtggtgaacttactggatctgcacgacaacacccctcgcaaaaagaccgattggttcaag
ctggtggacaagagtggaaaagaggacaaggcgcgaggcgagttcctgctagatatccaa
tttatgagaaacaacatgtcagctagcatgttagacctttcaatgcaggacaaaccgcgc
tcccgcatctccaagctgaaggacaaagtccgtgggaagaaaagggatggcttctctgac
tctgcttcagctatcgttccctctgtcagtaaggtcctcacagacagcgagggagaggtt
gacacacagtccctcaatcagtccgaaggagtgaagaagaaatctaaactcaaaagcctc
tttgctcccaaatcaaacttgcaccgtaacatctcacagtccatgtctacactggggact
cttccagagaagaattcatctatcagtggcagccgctcatctggcctcaatgtggactct
cctgatgttaaaaagaaattcaaattcctgggacacaagcgaacaggcagctctgacagc
aagcactctctgggtgctttctctcttctgggtcgctccaagcagagcaacagtgacctg
aacaacctgtgcatcaatggcagccatgtgtacgcagaggaaacggatccccaaagtggt
tcgactctcagtctgaacagctcaggccaaggatctgtggaggacatccgcaaacacacc
tcagaagtctccgtagatacatttataagtgtaccagttccctcctttaagcatgagtca
acagataaggctatactggagcaacagcgtcatcaagaggaggaggagagaaggcaggca
gaagagaggcacacagcagaggccaagagggtggaggaggagaagtacagggtagaggcc
aagaggatgcaggaggaagaggagcatggacaacaagaggaacaggagaggaagagacac
ttccttgaagatgaggcaaggaggaagaaacagagagaggaggaggaagaagaaaggaga
aagcaagaggaagcggcagaatgccagaagctcgaggaggagcgacgcagatctgacgat
ctgaaacgacaggaggaggcctccatgagcgacaggctctcgtctctgtttggaatgatc
agaaagaaggaggagaaaaaagaggagctacccataacggctcctttcagcaattcagga
gatcctgataaactgagctcccacccctcagccaatccattcgaggtcattgatattggc
attgacaacgaaagaccagtggatcaccagaaatccagcggcaacccacaaaccccctct
gccatgctcttcctcaaccgtactgctaaagtgtctgcagtcaaacccagatatactcaa
tctttggagtctgaacctgctgagtgccaaacccccagtcagctgtgtccttccccagca
acctctgaatccaacctccctagtgtgccgtttgactcccctgatactttctccagtttc
cgctcatctctggctttaccaaacataagtcaaagcccgtctggttctcctcgtggcagc
atagaggatttgtccacaggatttgtggaatcttcactcatggcggagaagaaaagaaga
gctcctgaggcacccttgtacataacacatggggacaaaactggaggaaataccgctcct
ttcagagagatcactaaccctgcatatgtagagaaagataacccagaaccaggcagaaaa
atgtctctaccgcttcctgattacaacaccctatttcctgataagagacatggagtgcaa
ggccacacccgatgggaccatataattgctgaggtcaatcagaaacacagggactttgca
gagatgagtgtggatgacccagaggagaatgaacccacgttttcactcccacaggagagt
cctgctatgcaattactgaagcattaccaaacacaatctcagcaaaccaaacccgtgtca
ataaaaaaagcagcagccccagttccccctaaaccagtagcacctccaggccctcgatca
gtaactgattccagtcaaacacagagccagaatactgccagccaatctctcatgaggcct
aatctgcccacagtttcagaacctgtaaacacaagaagagaaagtctctcagagttttcc
aggtttggcgcaaggagggcgctacgcccatcacctggagcaacacatgcacccagatca
gctagccaaatggacttgaaaacaaccacaccagacgatgaaagagaagtgcaagccact
gtaaatatagaggcacccacagctcaacccagacagagggctcgtggcaaagagacagta
cagcaagaagactctgctctgacaccagtggtctcagacaaatatatgaacagtaccatc
caaacattacctagttcaggtatgagcagcatggtcacaaaaggcaggcaggcagagctt
gacccattccccagtactgagcttctctcaaaagacccatgggcacagctgaagccaaac
caagaagtagatcccttttccactggcagtgtacaaaaagagcagacagttgaagatcgc
ggaatgaccccagacgatcttgataacatttttagtcaagagaaacagacagattttgtt
gcagatttttatggcagcgagtcaaacaaacacactgagtacgtgaaaaaagattctcaa
aatcaggtcagtcctgttttccatggagggaattcacagagacaaaaacaaagtattccg
ttcacaactcactcggataataagacttccaggtctcaacaaaagcctgtacataaagaa
gaaacaaccataaccacagctaatcaagtctactccgcaaaaagtgtcaggaatgggtcc
ataacacagaagccttcagatgatgcgagaacacatagggtatttcatggacgcgaagat
caatttggagctgaacctttgaggtcaacgttgacgtcctcggaacccctcaagctagat
gtggaggaagtggaaccagcatctccggcaggaggtttgtctgtgggaaaggcatctttg
ccggcattggtctcaccctctgatgttcagcctgtcagtgctcagaatagcaatggaggt
gggctagccttaactccacgcaggcctcatcctgtgaagcccatgagctcagagagccag
catccaatcagcaccactgctgtgaaagagaaaaaggtccgcaagagctcaccagggaag
gttcaggtggccaactcggtggatagtggtcctttcactcagctgacacaggaagagttg
atcacaatggtggtgaggcagcaagccgacctgtccaagaaggactctcagatcgtggag
ctcgaggagtacattgacaacctgctggtacgtgtcatagacgagcagccgggcatcctg
caatttgataaaccagcgtaa
DBGET
integrated database retrieval system
