Cyclopterus lumpus (lumpfish): 117736185
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Entry
117736185 CDS
T09199
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117736185 (sart3)
03036 Chromosome and associated proteins [BR:
clum03036
]
117736185 (sart3)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117736185 (sart3)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
117736185 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
PRP6_TPR
HAT_Syf1_M
RRM_11
FAT
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
117736185
NCBI-ProteinID:
XP_034397219
Ensembl:
ENSCLMG00005020035
UniProt:
A0A8C3AMS2
LinkDB
All DBs
Position
9:complement(18202316..18210922)
Genome browser
AA seq
942 aa
AA seq
DB search
MAASSDAEQTHLQDMEEGDAGMEKRNMGSDGEEEAEEEGMGVEHPSEEEEEDEGNSSEDE
KENEAEIQRLEEQLSINAFDYNCHIDLIKLLKQEGELVRLRKARQKMSELFPLTEEIWLD
WLKDEIRLTEEEPNREKVYELFETAVIDYICPDIWLEYAQYSIGGMGSPGGMDKVRSIFE
RAVTAVGLHMTKGHVVWEAYREFENVMLSTVQPPPGRILNHEEQELLKTQIERIHTLFRR
QLAVPFMDMEATYAEYDEWSEHGVADTVIHQYKKALQQMAKCKSFEEALIVAEPPKLAEY
QSYIDFELKEGDPARVQIIFERTLAENCLVPDMWAKYTTYLDRQLKIKDMVLSSHERAVR
NCPWTMGLWKSYLLALERHGADHQTVSDVFEKALNAGFIQATDYVEIWQAYLDYLRRRVD
FSKESSKELEELRGAFSRSLDYMKQDVEERFSESGDSSCIIMQIWARIEALHCKNIQKAR
ELWDSIMTKGNAKYANMWLEYYNLERSYGDPLHCRKALHRAVQCTSDYPEHVSEVLLTFE
RVEGSLEDWDVAVQKTETRLNRINVQRAKVAEKEANLAGQDVGRADQRRKTKADKKGQKN
VQKGTRAGEKRKAEQDDNSGTKRHRGNGNQPSEYMETETGLSGRNAPPGYKPAAHGNKRA
AAAVHKQNDDDDKPELRNDNSSVFISNLAYTLEEPEAKLRTQFETCGPVKQIRPVFGTKG
NFKGYCYVQFESTVSVAEALKLDRREVEGRPMFVSPCVDKNKNPDFKMFKYNTSMEKQKI
FISGLPFSCNKEQLEEICKSHGTVKDIRLVTYRSGKPKGLAYVEFADEAQASQAVLKLDG
MCVEDNTISVAISNPPSRNMDKPGSHRLMTDMPRQVFGARGRGRTQLSLLPRSLHRQSGS
VSKVENGTAAERMPATASEALNAAGETKPLSNSDFARMLLSK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcaagcgacgcagagcaaacgcatttgcaagacatggaggagggagacgca
gggatggagaagagaaatatgggatcggatggagaagaagaggcggaggaggagggtatg
ggagtagaacatccaagtgaagaagaggaagaggatgaggggaattcgtctgaagacgag
aaagagaatgaagcggagatccaacggttggaagagcagttgtcaatcaatgctttcgac
tacaactgccacattgatctcatcaaactactgaagcaggagggagaacttgtccgtctg
cgaaaggcgaggcagaaaatgagtgaacttttcccactcactgaagagatctggctggat
tggctcaaggatgaaatccgtctgactgaagaggagccaaaccgggagaaagtatatgaa
ctttttgagacggctgtcatagactatatctgtccagatatctggcttgaatatgcccag
tattcaattggtggcatgggctcaccaggtgggatggacaaagtgcgatccatctttgag
agggctgtgacagctgtggggcttcacatgaccaagggacacgtggtgtgggaagcgtac
agagagtttgagaacgtcatgctttccacagtacagcctccacctggaaggattcttaat
cacgaggagcaggaactgctgaaaactcagattgagcgtatccacacactgtttcgtcgc
cagctggccgttccttttatggacatggaagccacctatgcagagtatgacgagtggtct
gaacatggggtggctgacacggtcatacatcagtacaaaaaggctctgcagcagatggcg
aagtgcaaatcttttgaagaagcactgatagtagcagaacctcctaaactggcagagtat
cagtcctacattgactttgaactgaaggagggcgaccctgcacgggtccagatcatcttt
gagcggactctagcagagaactgccttgtaccagacatgtgggcaaaatacaccacctat
cttgatcgtcagctgaagatcaaagacatggttctctcctctcatgaacgtgcagtcagg
aactgcccctggacgatgggtctgtggaagagctacctgctcgctctggagaggcatggc
gctgaccatcagacagtctcagatgtatttgaaaaggcgctgaatgcaggtttcattcaa
gcaacggattatgtggaaatttggcaggcatacctcgactatctgaggagacgtgtggat
ttcagcaaagaatcaagtaaagagttggaggagctacgaggagctttctctcgctctcta
gactacatgaagcaagatgtggaagaaagatttagtgaaagtggagattcttcttgtatc
ataatgcagatctgggcgaggatagaggccctccactgcaagaacatccaaaaagccaga
gaactgtgggacagtatcatgacaaaggggaacgctaagtatgccaacatgtggctggag
tactataaccttgagaggtcctatggagaccctcttcactgtcggaaagctctccacaga
gcagttcagtgcacctcagactacccggagcatgtgagtgaagtcctgctcacatttgag
agggttgaaggttctcttgaggactgggacgtggcggtgcagaagacagagacccggctg
aataggattaatgtgcaacgggcaaaggttgctgagaaagaggccaacctggctggccaa
gatgttgggagagctgatcagcggcgaaaaaccaaggcagacaagaaaggtcagaagaat
gtccagaagggaactcgagctggggagaagagaaaagcagagcaggatgataactctggt
actaaaaggcacagaggaaatgggaaccaaccgtcggagtacatggagaccgagacggga
ctctctgggaggaatgctccgcctggctataagcctgctgcacacggcaataaaagggct
gcggccgctgtccacaagcagaacgatgacgatgacaagccagagcttcgcaatgataac
agcagcgtattcatcagcaacctggcatacaccctggaggagccagaggcaaagctgagg
acgcagtttgagacctgtggtcccgtcaaacagattcgcccggtcttcggcaccaaaggg
aacttcaaaggctactgctatgtacagtttgaatccacagtgtctgtggccgaagccttg
aagctggacagacgggaggtggagggcaggcccatgtttgtgtcgccgtgtgtagacaaa
aacaagaatccagactttaagatgttcaaatacaacacatccatggagaaacaaaagatc
ttcatctctgggctgccgttctcgtgcaataaagagcagctcgaggaaatctgcaaaagt
cacggcaccgtcaaagatattcgtctggtcacatatcgctcagggaaacccaagggtctg
gcgtatgttgagtttgcagatgaagcccaggcttctcaggcagttctgaaattggacggc
atgtgtgtcgaggacaacacgatctctgttgccataagcaaccctccgagcagaaacatg
gataaacctggttcccacaggctcatgacagacatgcctcgccaggtctttggagcgaga
ggaaggggacgcacccagctctcactgctgcctcgttccctgcaccgacaaagtgggtca
gttagcaaagtcgagaatgggaccgcggctgagcggatgccagccacagccagcgaggcg
ttgaatgcagccggagagacgaagcctttgtcaaattcagactttgcccggatgcttctc
agcaagtga
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