Cyclopterus lumpus (lumpfish): 117736236
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Entry
117736236 CDS
T09199
Symbol
trim36
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM36
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117736236 (trim36)
04121 Ubiquitin system [BR:
clum04121
]
117736236 (trim36)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117736236 (trim36)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117736236 (trim36)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117736236 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
DUF1826
U-box
Cdh1_DBD_1
Apyrase
Motif
Other DBs
NCBI-GeneID:
117736236
NCBI-ProteinID:
XP_034397324
Ensembl:
ENSCLMG00005002329
LinkDB
All DBs
Position
9:complement(21143638..21166768)
Genome browser
AA seq
746 aa
AA seq
DB search
MSAEMRRSSTTPVPIKNIERELICPICKELFTHPLILPCQHSVCHKCIRELLMLNHEDSF
DAGSECSLPGSPRSRVPSPSMERLDRLVRSGGSRGSISSPGWRRGSVTPRVTTIPCPGCQ
HDIDLGERGISMLFRNFTLENIVERYRQAARAAIAIMCNICKPPLQQEATKSCMDCKASY
CNECFKLHHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMYCEVCRRPVCHLCKLG
GSHANHKVTSMSSAYKILKEKLAKSIHYLISKEDQVRTQITDLELLVNQTEENGQLAERQ
ANEHFERLFETLQERKSEMLKSIEQSRNRRMDQLKTQMEEYQGMLENSGLVGYAQEVLKE
TDQSCFVQTAKQLHLRIQKATESLRTFHPASDPCFDEFLLDTSREETLLKEMCFGGVPDP
PLIDLSNSRVYNEASICWRLPMXHLPTDHHMLEYRRLGGPNKSPSQEDSEDSGGWRATER
VYGPSTVVCDLDADSLYSFRVRSCRNSMFSPHSPEVTFHTPPAPAFGFLFSDKCGFSTDR
LILNKRRDTVESVASMAFLLAAERVQTGSYIGLDYIIGDTGITQGRHYWAFKVEPYSYMV
KVGVASDSKLLEWFHNPRDTSSPRYDHDSGHDSGSEDTCYELSQPFTLLTLGMGKLFIPK
TSSSSTASTANAASVDPGNRVLPLPQRLGVCLDYDACRVFFYDADTMRCLYERQVDCSGT
MYPAFGLMGSGKVQLQEFTTAKRLTF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagagatgcggcgcagcagcacaactccggtcccgatcaaaaacatcgagagg
gagctgatctgcccgatctgcaaggagctcttcacccacccgctgatcctgccctgccag
cacagcgtctgccacaagtgtatcagggagctgctgatgctgaaccacgaggactctttt
gatgccggctccgagtgctccctgccgggcagccccaggtccagggtgccctccccgtcc
atggagaggctggaccggcttgtgagatcaggtgggtctcggggctccatctcgtccccc
gggtggcgccgaggctccgtgactccccgggtcaccaccatcccatgcccgggctgccag
cacgacatcgacctcggtgagcgcggcatcagcatgttgttccgtaacttcaccctggag
aacatcgtcgagcgctaccgccaggccgcccgcgcagccatcgccatcatgtgtaacatc
tgtaagcctccgctgcagcaggaggctacaaagagctgcatggactgcaaggctagctac
tgcaacgagtgcttcaagttgcaccatccctggggcacgcccaaagctcagcacgagtat
gttggtcccaccacaaattttaggcccaaggtgctcatgtgcccagagcacgagatggag
aaggttaacatgtactgtgaggtctgcagacgacccgtgtgtcacctctgcaagctggga
ggatcccacgccaaccacaaggtcacctccatgagcagcgcctataagatcctcaaggag
aagctggccaagagtatccattacctcatcagcaaagaggaccaggtccggactcagatt
actgatcttgagttgctcgtcaatcagaccgaggaaaatggacagctggcagagcgtcaa
gccaatgagcactttgagcgtctgttcgagactctgcaggagaggaagtctgagatgctg
aagtccatcgaacagtctagaaaccgacgcatggaccaactcaagactcagatggaggag
taccagggcatgctggagaacagtggtctcgtgggctacgctcaggaggtgctgaaggag
acggatcagtcctgctttgtacagactgcaaagcagctgcacctcaggatccagaaggcc
acggagtctctgaggaccttccatcctgcgtctgacccctgctttgatgagtttctgctg
gacacatccagagaagaaactctgctcaaagagatgtgctttggtggagtccctgaccct
cccttgattgacctgtccaatagcagagtctataatgaggcctcgatctgctggaggctg
ccgatgnnacacctacctacagatcaccacatgcttgaataccgcagactcggaggcccg
aacaagtccccgtcccaggaggacagtgaggacagtgggggctggagggctaccgagagg
gtgtacgggcctagcactgtggtgtgtgacctagacgctgacagcctgtactccttcagg
gtccgaagctgcaggaactccatgttcagcccccacagccctgaggtcaccttccacaca
ccacctgcacctgcttttggtttcctgttcagtgacaagtgtggcttcagtacggatcgc
ctcattctaaacaagcggcgggacactgtggagagcgtcgccagcatggccttcctccta
gcagcagaacgtgtgcagacgggcagctacattggcctagactacatcattggggacacg
ggcatcactcagggaagacactactgggccttcaaggtggagccgtactcctacatggtt
aaagttggagtggcctccgattcaaagctgctcgaatggtttcacaaccccagagacacc
agcagcccgaggtacgaccatgacagtgggcatgacagcggcagtgaagacacatgctat
gagctctcgcagcccttcaccctcctcaccttggggatgggcaaactcttcatccccaag
acttcttcatcctctactgcctccacagcgaacgcagcgtctgttgaccccggcaaccgc
gtgctccccttgccacagcgcttgggcgtatgcctagattacgatgcgtgccgggtgttt
ttttacgacgccgacaccatgaggtgcctttatgagaggcaggtggattgttcgggaaca
atgtatcccgctttcgggctcatgggcagcggaaaggtccaactgcaagagttcaccacc
gctaagagactgaccttctga
DBGET
integrated database retrieval system
