Cyclopterus lumpus (lumpfish): 117736239
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Entry
117736239 CDS
T09199
Symbol
krt1-c5
Name
(RefSeq) keratin, type 1, gene c5
KO
K07604
type I keratin, acidic
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117736239 (krt1-c5)
04147 Exosome [BR:
clum04147
]
117736239 (krt1-c5)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117736239 (krt1-c5)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117736239 (krt1-c5)
Exosomal proteins of other body fluids (saliva and urine)
117736239 (krt1-c5)
Exosomal proteins of colorectal cancer cells
117736239 (krt1-c5)
Exosomal proteins of melanoma cells
117736239 (krt1-c5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF4686
WXG100
BRE1
Crescentin
Fez1
FmiP_Thoc5
DUF1664
Motif
Other DBs
NCBI-GeneID:
117736239
NCBI-ProteinID:
XP_034397327
Ensembl:
ENSCLMG00005019483
LinkDB
All DBs
Position
9:complement(5973680..5980856)
Genome browser
AA seq
417 aa
AA seq
DB search
MASALSARSYSVRKPSFSSMSVRENVRSLLSKPPVTVAPSRSVSLGNGFNMPGASLCAND
KEDMQGLNDRLADYLDKVRSLERSNAELEVKIKQIMLEKVPRGHDIEGKMAQAHAIGQEV
RKKTLENARVMLEIENGKLAANDFMVKWEAEATLCQSVERDCQALKKAKSDHDQTTAAMR
SELDSLKEELYFLKQNHEEEMSLMTTRLGNEQVSVEVDAAQGPDLGAIIAELRVQYEGIA
RKNKEDSEAWYLNKVEAVQSEVKENNEALRSAQSEIIERRRFLQGLEVELDNLRKQVGML
EGNLGETGHKYSAEMERLQAKLTHLEDELSQLRSDMRRNKTDYEQLLRIKQNLEMEIATY
RRLLEGEEMVKEPPKNIPNVRTRKIVKVITQTVIDGKVVDECNEADQIEECKKVDAS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccctctccgcgcgcagctactccgtgcgcaagccctccttctccagcatg
tccgtcagggagaacgttcgcagcctcctctccaagccccccgtcaccgttgccccgtcc
cgctccgtctcactgggcaacggcttcaacatgccgggcgccagcctctgcgcaaacgat
aaggaggacatgcagggcctgaacgaccggctggccgactacctggacaaggtgcgctcg
ctggagaggtccaacgccgaactggaggtgaagatcaagcagatcatgctcgagaaggtt
ccgcgggggcacgacatcgaggggaagatggcccaggcacatgccatcgggcaggaggtg
agaaagaagacgctggagaacgcccgcgtcatgctggagattgaaaacggcaagctggcg
gccaatgacttcatggtcaaatgggaggcagaggccaccttgtgccagtcggtggagagg
gactgtcaggctctgaagaaggcaaagtctgaccacgaccaaaccaccgccgcgatgcga
tcagaactggacagcctgaaggaggagctctacttcctgaagcagaatcacgaggaggag
atgagtttaatgacgactcgcctgggcaacgagcaagtgagcgtcgaggtggacgcggct
cagggtccggatctgggcgccatcatcgctgagctcagggtccagtacgagggcatcgct
cgcaagaacaaggaggactccgaggcctggtacctcaacaaggtggaagcagtgcagtcg
gaggtcaaagaaaacaacgaggctttgcgttctgcccaaagtgagatcattgagagacgg
cgtttcctgcagggtctggaggtcgaactcgacaatctccggaagcaggtcggtatgttg
gaggggaacctgggagaaacggggcacaagtactctgcggagatggagcgtcttcaggcc
aagctgacccacctggaggacgagctgtctcagctccgctccgacatgcggcgcaacaag
accgactacgagcagctgctgcgcatcaaacagaacctggagatggagatcgccacctac
aggaggctgctggagggagaggaaatggtgaaagaacctcctaaaaatatacccaatgta
aggacaaggaagatagtcaaagtcatcacccagaccgtgatcgacggcaaggtggtggat
gagtgcaacgaggcggatcagatcgaggagtgcaaaaaagtcgatgcctcttaa
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integrated database retrieval system
